Cluster: CGMR061353_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR061353
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_489575 | k141_489575_1 | 1 | 642 | + | 3.A.1.7.3 |
| pfam | k141_489575 | k141_489575_2 | 1352 | 2281 | + | AP_endonuc_2 |
| pfam | k141_489575 | k141_489575_3 | 2608 | 3264 | + | DNA_binding_1 | Methyltransf_1N |
| TC | k141_489575 | k141_489575_4 | 4225 | 5535 | + | 2.A.42.2.1 |
| CAZyme | k141_489575 | k141_489575_5 | 6685 | 8007 | - | GH13_33 |
Gene ID: k141_489575_1
Type: TC
Location: 1 - 642 (+)
Type: TC
Location: 1 - 642 (+)
Gene ID: k141_489575_2
Type: pfam
Location: 1352 - 2281 (+)
Type: pfam
Location: 1352 - 2281 (+)
Gene ID: k141_489575_3
Type: pfam
Location: 2608 - 3264 (+)
Type: pfam
Location: 2608 - 3264 (+)
Gene ID: k141_489575_4
Type: TC
Location: 4225 - 5535 (+)
Type: TC
Location: 4225 - 5535 (+)
Gene ID: k141_489575_5
Type: CAZyme
Location: 6685 - 8007 (-)
Type: CAZyme
Location: 6685 - 8007 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Frigididesulfovibrio
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.