Cluster: CGMR061251_CGC17
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR061251
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_4569 | k141_4569_25 | 27239 | 29137 | + | 9.B.106.2.2 |
| TC | k141_4569 | k141_4569_26 | 29226 | 29984 | + | 2.A.79.1.5 |
| pfam | k141_4569 | k141_4569_27 | 29986 | 30435 | + | ThrE_2 |
| pfam | k141_4569 | k141_4569_28 | 30548 | 31720 | + | Chal_sti_synt_N | HMG_CoA_synt_N | HMG_CoA_synt_C | HMG_CoA_synt_C |
| TC | k141_4569 | k141_4569_29 | 31720 | 32994 | + | 2.A.6.6.11 |
| TF | k141_4569 | k141_4569_30 | 33032 | 33997 | - | LacI |
| CAZyme | k141_4569 | k141_4569_31 | 33978 | 35432 | - | GH32 |
| TC | k141_4569 | k141_4569_32 | 35812 | 37698 | + | 4.A.1.2.12 |
Gene ID: k141_4569_25
Type: TC
Location: 27239 - 29137 (+)
Type: TC
Location: 27239 - 29137 (+)
Gene ID: k141_4569_26
Type: TC
Location: 29226 - 29984 (+)
Type: TC
Location: 29226 - 29984 (+)
Gene ID: k141_4569_27
Type: pfam
Location: 29986 - 30435 (+)
Type: pfam
Location: 29986 - 30435 (+)
Gene ID: k141_4569_28
Type: pfam
Location: 30548 - 31720 (+)
Type: pfam
Location: 30548 - 31720 (+)
Gene ID: k141_4569_29
Type: TC
Location: 31720 - 32994 (+)
Type: TC
Location: 31720 - 32994 (+)
Gene ID: k141_4569_30
Type: TF
Location: 33032 - 33997 (-)
Type: TF
Location: 33032 - 33997 (-)
Gene ID: k141_4569_31
Type: CAZyme
Location: 33978 - 35432 (-)
Type: CAZyme
Location: 33978 - 35432 (-)
Gene ID: k141_4569_32
Type: TC
Location: 35812 - 37698 (+)
Type: TC
Location: 35812 - 37698 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.