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Cluster: CGMR061206_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_216993 k141_216993_57 56242 57684 + GH125
pfam k141_216993 k141_216993_58 57887 58462 + DUF4199
CAZyme k141_216993 k141_216993_59 58468 59421 + GT2
pfam k141_216993 k141_216993_60 59424 59921 + DUF6452
pfam k141_216993 k141_216993_61 59881 60621 + DUF6048
TC k141_216993 k141_216993_62 60618 61190 + 2.A.107.1.2
pfam k141_216993 k141_216993_63 61187 62224 + ApbE
TF k141_216993 k141_216993_64 62232 62924 + MarR
TC k141_216993 k141_216993_65 63038 64174 + 9.B.146.1.4
Gene ID: k141_216993_57
Type: CAZyme
Location: 56242 - 57684 (+)
Gene ID: k141_216993_58
Type: pfam
Location: 57887 - 58462 (+)
Gene ID: k141_216993_59
Type: CAZyme
Location: 58468 - 59421 (+)
Gene ID: k141_216993_60
Type: pfam
Location: 59424 - 59921 (+)
Gene ID: k141_216993_61
Type: pfam
Location: 59881 - 60621 (+)
Gene ID: k141_216993_62
Type: TC
Location: 60618 - 61190 (+)
Gene ID: k141_216993_63
Type: pfam
Location: 61187 - 62224 (+)
Gene ID: k141_216993_64
Type: TF
Location: 62232 - 62924 (+)
Gene ID: k141_216993_65
Type: TC
Location: 63038 - 64174 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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