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Cluster: CGMR061206_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_16170 k141_16170_20 30946 33138 - GH36
NULL(UNKNOWN) k141_16170 k141_16170_21 33415 33579 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_16170 k141_16170_22 34601 36784 - 3.A.3.5.20
pfam k141_16170 k141_16170_23 37432 37899 + LRR_5
pfam k141_16170 k141_16170_24 37872 39875 + LRR_5 | LRR_5 | LRR_5 | LRR_5 | LRR_5
TC k141_16170 k141_16170_25 40228 41070 + 3.A.1.132.6
NULL(UNKNOWN) k141_16170 k141_16170_26 41083 41910 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_16170 k141_16170_27 41907 42284 + GntR
TC k141_16170 k141_16170_28 42363 43085 + 3.A.1.122.2
TC k141_16170 k141_16170_29 43091 44347 + 3.A.1.122.1
TC k141_16170 k141_16170_30 44495 45739 + 3.A.1.122.2
pfam k141_16170 k141_16170_31 45793 46896 + HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
TC k141_16170 k141_16170_32 46903 48210 + 1.B.17.2.6
TC k141_16170 k141_16170_33 48392 48700 - 2.A.7.1.11
Gene ID: k141_16170_20
Type: CAZyme
Location: 30946 - 33138 (-)
Gene ID: k141_16170_21
Type:
Location: 33415 - 33579 (-)
Gene ID: k141_16170_22
Type: TC
Location: 34601 - 36784 (-)
Gene ID: k141_16170_23
Type: pfam
Location: 37432 - 37899 (+)
Gene ID: k141_16170_24
Type: pfam
Location: 37872 - 39875 (+)
Gene ID: k141_16170_25
Type: TC
Location: 40228 - 41070 (+)
Gene ID: k141_16170_26
Type:
Location: 41083 - 41910 (+)
Gene ID: k141_16170_27
Type: TF
Location: 41907 - 42284 (+)
Gene ID: k141_16170_28
Type: TC
Location: 42363 - 43085 (+)
Gene ID: k141_16170_29
Type: TC
Location: 43091 - 44347 (+)
Gene ID: k141_16170_30
Type: TC
Location: 44495 - 45739 (+)
Gene ID: k141_16170_31
Type: pfam
Location: 45793 - 46896 (+)
Gene ID: k141_16170_32
Type: TC
Location: 46903 - 48210 (+)
Gene ID: k141_16170_33
Type: TC
Location: 48392 - 48700 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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