Cluster: CGMR061206_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR061206
- CGC Family ID: CGCFAM_00234
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_15391 | k141_15391_22 | 22063 | 23373 | - | 2.A.35.1.5 |
| CAZyme | k141_15391 | k141_15391_23 | 24090 | 27512 | - | GH84 |
| pfam | k141_15391 | k141_15391_24 | 27549 | 30182 | - | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | Val_tRNA-synt_C | tRNA-synt_1_2 |
| NULL(UNKNOWN) | k141_15391 | k141_15391_25 | 30319 | 30603 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_15391 | k141_15391_26 | 30519 | 32855 | - | GH20 |
Gene ID: k141_15391_22
Type: TC
Location: 22063 - 23373 (-)
Type: TC
Location: 22063 - 23373 (-)
Gene ID: k141_15391_23
Type: CAZyme
Location: 24090 - 27512 (-)
Type: CAZyme
Location: 24090 - 27512 (-)
Gene ID: k141_15391_24
Type: pfam
Location: 27549 - 30182 (-)
Type: pfam
Location: 27549 - 30182 (-)
Gene ID: k141_15391_25
Type:
Location: 30319 - 30603 (+)
Type:
Location: 30319 - 30603 (+)
Gene ID: k141_15391_26
Type: CAZyme
Location: 30519 - 32855 (-)
Type: CAZyme
Location: 30519 - 32855 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Alloprevotella
Species
Alloprevotella sp000431275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.