Cluster: CGMR061206_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR061206
- CGC Family ID: CGCFAM_00700
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_142346 | k141_142346_13 | 10812 | 13601 | + | 1.B.14.12.2 |
| pfam | k141_142346 | k141_142346_14 | 13717 | 14451 | - | Radical_SAM | Fer4_12 |
| pfam | k141_142346 | k141_142346_15 | 14527 | 16755 | - | Gly_radical | PFL-like |
| CAZyme | k141_142346 | k141_142346_16 | 17066 | 18115 | + | GT2 |
Gene ID: k141_142346_13
Type: TC
Location: 10812 - 13601 (+)
Type: TC
Location: 10812 - 13601 (+)
Gene ID: k141_142346_14
Type: pfam
Location: 13717 - 14451 (-)
Type: pfam
Location: 13717 - 14451 (-)
Gene ID: k141_142346_15
Type: pfam
Location: 14527 - 16755 (-)
Type: pfam
Location: 14527 - 16755 (-)
Gene ID: k141_142346_16
Type: CAZyme
Location: 17066 - 18115 (+)
Type: CAZyme
Location: 17066 - 18115 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Alloprevotella
Species
Alloprevotella sp000431275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_142346_14 | vegetarian > vegan | 1.14611 | 0.01548 |