Cluster: CGMR061206_CGC18
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 8
- Substrate:
- Genome ID: CGMR061206
- CGC Family ID: CGCFAM_00189
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_15117 | k141_15117_20 | 21783 | 22715 | + | GT2 |
| pfam | k141_15117 | k141_15117_21 | 22913 | 24064 | + | Acyl_transf_3 |
| CAZyme | k141_15117 | k141_15117_22 | 24064 | 24993 | + | GT2 |
| CAZyme | k141_15117 | k141_15117_23 | 25006 | 25938 | + | GT101 |
| CAZyme | k141_15117 | k141_15117_24 | 25935 | 26912 | + | GT2 |
| CAZyme | k141_15117 | k141_15117_25 | 26912 | 27889 | + | GT2 |
| NULL(UNKNOWN) | k141_15117 | k141_15117_26 | 27886 | 29190 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_15117 | k141_15117_27 | 29187 | 30317 | + | GT4 |
| CAZyme | k141_15117 | k141_15117_28 | 30369 | 31484 | + | GT4 |
| CAZyme | k141_15117 | k141_15117_29 | 31508 | 32992 | + | GT4 |
| pfam | k141_15117 | k141_15117_30 | 33016 | 34113 | + | NTP_transf_5 |
| NULL(UNKNOWN) | k141_15117 | k141_15117_31 | 34113 | 35033 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_15117 | k141_15117_32 | 35030 | 35839 | + | 1.B.18.3.3 |
| NULL(UNKNOWN) | k141_15117 | k141_15117_33 | 35905 | 36543 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_15117 | k141_15117_34 | 36510 | 38219 | + | 8.A.3.3.4 |
Gene ID: k141_15117_20
Type: CAZyme
Location: 21783 - 22715 (+)
Type: CAZyme
Location: 21783 - 22715 (+)
Gene ID: k141_15117_21
Type: pfam
Location: 22913 - 24064 (+)
Type: pfam
Location: 22913 - 24064 (+)
Gene ID: k141_15117_22
Type: CAZyme
Location: 24064 - 24993 (+)
Type: CAZyme
Location: 24064 - 24993 (+)
Gene ID: k141_15117_23
Type: CAZyme
Location: 25006 - 25938 (+)
Type: CAZyme
Location: 25006 - 25938 (+)
Gene ID: k141_15117_24
Type: CAZyme
Location: 25935 - 26912 (+)
Type: CAZyme
Location: 25935 - 26912 (+)
Gene ID: k141_15117_25
Type: CAZyme
Location: 26912 - 27889 (+)
Type: CAZyme
Location: 26912 - 27889 (+)
Gene ID: k141_15117_26
Type:
Location: 27886 - 29190 (+)
Type:
Location: 27886 - 29190 (+)
Gene ID: k141_15117_27
Type: CAZyme
Location: 29187 - 30317 (+)
Type: CAZyme
Location: 29187 - 30317 (+)
Gene ID: k141_15117_28
Type: CAZyme
Location: 30369 - 31484 (+)
Type: CAZyme
Location: 30369 - 31484 (+)
Gene ID: k141_15117_29
Type: CAZyme
Location: 31508 - 32992 (+)
Type: CAZyme
Location: 31508 - 32992 (+)
Gene ID: k141_15117_30
Type: pfam
Location: 33016 - 34113 (+)
Type: pfam
Location: 33016 - 34113 (+)
Gene ID: k141_15117_31
Type:
Location: 34113 - 35033 (+)
Type:
Location: 34113 - 35033 (+)
Gene ID: k141_15117_32
Type: TC
Location: 35030 - 35839 (+)
Type: TC
Location: 35030 - 35839 (+)
Gene ID: k141_15117_33
Type:
Location: 35905 - 36543 (+)
Type:
Location: 35905 - 36543 (+)
Gene ID: k141_15117_34
Type: TC
Location: 36510 - 38219 (+)
Type: TC
Location: 36510 - 38219 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Alloprevotella
Species
Alloprevotella sp000431275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.