Cluster: CGMR060969_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR060969
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_10887 | k141_10887_37 | 36285 | 42698 | - | GH31_18 |
| TF | k141_10887 | k141_10887_38 | 43204 | 43644 | - | MarR |
| NULL(UNKNOWN) | k141_10887 | k141_10887_39 | 43749 | 44075 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_10887 | k141_10887_40 | 44271 | 45098 | - | 4.A.6.1.6 |
| TC | k141_10887 | k141_10887_41 | 45098 | 45955 | - | 4.A.6.1.1 |
| TC | k141_10887 | k141_10887_42 | 46028 | 46516 | - | 4.A.6.1.9 |
Gene ID: k141_10887_37
Type: CAZyme
Location: 36285 - 42698 (-)
Type: CAZyme
Location: 36285 - 42698 (-)
Gene ID: k141_10887_38
Type: TF
Location: 43204 - 43644 (-)
Type: TF
Location: 43204 - 43644 (-)
Gene ID: k141_10887_39
Type:
Location: 43749 - 44075 (-)
Type:
Location: 43749 - 44075 (-)
Gene ID: k141_10887_40
Type: TC
Location: 44271 - 45098 (-)
Type: TC
Location: 44271 - 45098 (-)
Gene ID: k141_10887_41
Type: TC
Location: 45098 - 45955 (-)
Type: TC
Location: 45098 - 45955 (-)
Gene ID: k141_10887_42
Type: TC
Location: 46028 - 46516 (-)
Type: TC
Location: 46028 - 46516 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_10887_37 | vegetarian > vegan | 2.19784 | 0.00969 |