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Cluster: CGMR060950_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_16617 k141_16617_3 1919 2887 - GT2
pfam k141_16617 k141_16617_4 2888 3994 - LytR_cpsA_psr
TC k141_16617 k141_16617_5 4006 5424 - 9.B.18.1.1
CAZyme k141_16617 k141_16617_6 5556 6512 - GT2
NULL(UNKNOWN) k141_16617 k141_16617_7 6530 6739 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_16617 k141_16617_8 7660 10425 - GH3
TF k141_16617 k141_16617_9 10537 11469 + HTH_AraC | HTH_AraC
TC k141_16617 k141_16617_10 11713 13383 - 3.A.1.135.5
TC k141_16617 k141_16617_11 13364 15244 - 3.A.1.210.3
Gene ID: k141_16617_3
Type: CAZyme
Location: 1919 - 2887 (-)
Gene ID: k141_16617_4
Type: pfam
Location: 2888 - 3994 (-)
Gene ID: k141_16617_5
Type: TC
Location: 4006 - 5424 (-)
Gene ID: k141_16617_6
Type: CAZyme
Location: 5556 - 6512 (-)
Gene ID: k141_16617_7
Type:
Location: 6530 - 6739 (-)
Gene ID: k141_16617_8
Type: CAZyme
Location: 7660 - 10425 (-)
Gene ID: k141_16617_9
Type: TF
Location: 10537 - 11469 (+)
Gene ID: k141_16617_10
Type: TC
Location: 11713 - 13383 (-)
Gene ID: k141_16617_11
Type: TC
Location: 13364 - 15244 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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