Cluster: CGMR060950_CGC38
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR060950
- CGC Family ID: CGCFAM_00815
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_57351 | k141_57351_31 | 31088 | 31873 | + | 3.A.1.17.1 |
| TC | k141_57351 | k141_57351_32 | 31849 | 32667 | + | 3.A.1.16.2 |
| STP | k141_57351 | k141_57351_33 | 32758 | 33843 | + | SBP_bac_3 |
| NULL(UNKNOWN) | k141_57351 | k141_57351_34 | 34000 | 34821 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_57351 | k141_57351_35 | 34946 | 36043 | + | 3.A.1.17.2 |
| NULL(UNKNOWN) | k141_57351 | k141_57351_36 | 36122 | 37027 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_57351 | k141_57351_37 | 37087 | 38235 | + | CE9 |
Gene ID: k141_57351_31
Type: TC
Location: 31088 - 31873 (+)
Type: TC
Location: 31088 - 31873 (+)
Gene ID: k141_57351_32
Type: TC
Location: 31849 - 32667 (+)
Type: TC
Location: 31849 - 32667 (+)
Gene ID: k141_57351_33
Type: STP
Location: 32758 - 33843 (+)
Type: STP
Location: 32758 - 33843 (+)
Gene ID: k141_57351_34
Type:
Location: 34000 - 34821 (+)
Type:
Location: 34000 - 34821 (+)
Gene ID: k141_57351_35
Type: TC
Location: 34946 - 36043 (+)
Type: TC
Location: 34946 - 36043 (+)
Gene ID: k141_57351_36
Type:
Location: 36122 - 37027 (+)
Type:
Location: 36122 - 37027 (+)
Gene ID: k141_57351_37
Type: CAZyme
Location: 37087 - 38235 (+)
Type: CAZyme
Location: 37087 - 38235 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900756925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_57351_34 | vegetarian > vegan | 1.48939 | 0.01882 |