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Cluster: CGMR060950_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_171313 k141_171313_11 9866 11320 - 2.A.66.1.12
CAZyme k141_171313 k141_171313_12 11626 13332 + CE1
TC k141_171313 k141_171313_13 13432 14352 + 3.A.1.1.10
TC k141_171313 k141_171313_14 14373 15293 + 3.A.1.1.29
NULL(UNKNOWN) k141_171313 k141_171313_15 15360 17129 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_171313 k141_171313_16 17313 18353 + LacI
CAZyme k141_171313 k141_171313_17 18480 20792 + CE1 | CE1
CAZyme k141_171313 k141_171313_18 20848 22455 + GH51_1
peptidase k141_171313 k141_171313_19 22471 23265 + S09.UPW
CAZyme k141_171313 k141_171313_20 23267 24043 + CE1
TC k141_171313 k141_171313_21 24132 25541 + 2.A.66.1.47
CAZyme k141_171313 k141_171313_22 25653 27614 + GH120 | GH120
CAZyme k141_171313 k141_171313_23 27652 31512 + GH43_35 | GH51_2
CAZyme k141_171313 k141_171313_24 31653 33803 + GH3
TC k141_171313 k141_171313_25 34108 35466 + 2.A.22.5.3
TC k141_171313 k141_171313_26 35659 37155 + 9.B.34.1.2
TC k141_171313 k141_171313_27 37332 39305 + 8.A.59.4.1
pfam k141_171313 k141_171313_28 39363 40298 + DUF6709
pfam k141_171313 k141_171313_29 40292 40546 + Zn_ribbon_15
CAZyme k141_171313 k141_171313_30 40670 42079 - GH43_35
TF k141_171313 k141_171313_31 42169 43269 + GntR
sulfatase k141_171313 k141_171313_32 43315 44922 - S1_63
TC k141_171313 k141_171313_33 44955 46340 - 2.A.2.3.3
Gene ID: k141_171313_11
Type: TC
Location: 9866 - 11320 (-)
Gene ID: k141_171313_12
Type: CAZyme
Location: 11626 - 13332 (+)
Gene ID: k141_171313_13
Type: TC
Location: 13432 - 14352 (+)
Gene ID: k141_171313_14
Type: TC
Location: 14373 - 15293 (+)
Gene ID: k141_171313_15
Type:
Location: 15360 - 17129 (+)
Gene ID: k141_171313_16
Type: TF
Location: 17313 - 18353 (+)
Gene ID: k141_171313_17
Type: CAZyme
Location: 18480 - 20792 (+)
Gene ID: k141_171313_18
Type: CAZyme
Location: 20848 - 22455 (+)
Gene ID: k141_171313_19
Type: peptidase
Location: 22471 - 23265 (+)
Gene ID: k141_171313_20
Type: CAZyme
Location: 23267 - 24043 (+)
Gene ID: k141_171313_21
Type: TC
Location: 24132 - 25541 (+)
Gene ID: k141_171313_22
Type: CAZyme
Location: 25653 - 27614 (+)
Gene ID: k141_171313_23
Type: CAZyme
Location: 27652 - 31512 (+)
Gene ID: k141_171313_24
Type: CAZyme
Location: 31653 - 33803 (+)
Gene ID: k141_171313_25
Type: TC
Location: 34108 - 35466 (+)
Gene ID: k141_171313_26
Type: TC
Location: 35659 - 37155 (+)
Gene ID: k141_171313_27
Type: TC
Location: 37332 - 39305 (+)
Gene ID: k141_171313_28
Type: pfam
Location: 39363 - 40298 (+)
Gene ID: k141_171313_29
Type: pfam
Location: 40292 - 40546 (+)
Gene ID: k141_171313_30
Type: CAZyme
Location: 40670 - 42079 (-)
Gene ID: k141_171313_31
Type: TF
Location: 42169 - 43269 (+)
Gene ID: k141_171313_32
Type: sulfatase
Location: 43315 - 44922 (-)
Gene ID: k141_171313_33
Type: TC
Location: 44955 - 46340 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_171313_11 vegan > omnivore 2.04763 0.00245
k141_171313_11 vegetarian > omnivore 2.14269 0.01416
k141_171313_12 vegan > omnivore 3.66454 0.00245
k141_171313_12 vegetarian > omnivore 3.35845 0.01416
k141_171313_13 vegan > omnivore 2.49015 0.00245
k141_171313_13 vegetarian > omnivore 2.00862 0.01416
k141_171313_14 vegetarian > omnivore 2.13549 0.01416
k141_171313_14 vegan > omnivore 3.02276 0.00245
k141_171313_15 vegan > omnivore 2.34227 0.00245
k141_171313_15 vegetarian > omnivore 1.47025 0.01416
k141_171313_16 vegan > omnivore 3.11025 0.00245
k141_171313_16 vegetarian > omnivore 2.23916 0.01416
k141_171313_17 vegan > omnivore 1.97484 0.00245
k141_171313_17 vegetarian > omnivore 1.59487 0.01416
k141_171313_18 vegetarian > omnivore 3.15589 0.01416
k141_171313_18 vegan > omnivore 3.73900 0.00245
k141_171313_19 vegetarian > omnivore 2.00808 0.01416
k141_171313_19 vegan > omnivore 2.37412 0.00245
k141_171313_20 vegetarian > omnivore 1.83096 0.01416
k141_171313_20 vegan > omnivore 2.32258 0.00245
k141_171313_21 vegan > omnivore 2.74443 0.00245
k141_171313_21 vegetarian > omnivore 2.06902 0.01416
k141_171313_22 vegan > omnivore 2.95244 0.00245
k141_171313_22 vegetarian > omnivore 2.26586 0.01416
k141_171313_23 vegetarian > omnivore 2.31685 0.01416
k141_171313_23 vegan > omnivore 2.49948 0.00245

🧭 Explore Read Mapping of CGC

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