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Cluster: CGMR060950_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_74986 k141_74986_23 30976 33420 + GH148
CAZyme k141_74986 k141_74986_24 33438 35744 + GH94
TC k141_74986 k141_74986_25 35833 36780 + 3.A.1.1.10
TC k141_74986 k141_74986_26 36793 37707 + 3.A.1.1.9
pfam k141_74986 k141_74986_27 37724 38014 + Bac_rhamnosid_C
CAZyme k141_74986 k141_74986_28 37992 40427 + GH3
CAZyme k141_74986 k141_74986_29 40405 42315 + GH43_28
pfam k141_74986 k141_74986_30 43327 44769 + SBP_bac_8
TC k141_74986 k141_74986_31 44828 45706 + 3.A.1.1.28
TC k141_74986 k141_74986_32 45720 46553 + 3.A.1.1.36
CAZyme k141_74986 k141_74986_33 46563 47645 + GH130_4
TF k141_74986 k141_74986_34 47642 48685 + LacI
CAZyme k141_74986 k141_74986_35 48704 52951 + CBM32 | CBM32
Gene ID: k141_74986_23
Type: CAZyme
Location: 30976 - 33420 (+)
Gene ID: k141_74986_24
Type: CAZyme
Location: 33438 - 35744 (+)
Gene ID: k141_74986_25
Type: TC
Location: 35833 - 36780 (+)
Gene ID: k141_74986_26
Type: TC
Location: 36793 - 37707 (+)
Gene ID: k141_74986_27
Type: pfam
Location: 37724 - 38014 (+)
Gene ID: k141_74986_28
Type: CAZyme
Location: 37992 - 40427 (+)
Gene ID: k141_74986_29
Type: CAZyme
Location: 40405 - 42315 (+)
Gene ID: k141_74986_30
Type: pfam
Location: 43327 - 44769 (+)
Gene ID: k141_74986_31
Type: TC
Location: 44828 - 45706 (+)
Gene ID: k141_74986_32
Type: TC
Location: 45720 - 46553 (+)
Gene ID: k141_74986_33
Type: CAZyme
Location: 46563 - 47645 (+)
Gene ID: k141_74986_34
Type: TF
Location: 47642 - 48685 (+)
Gene ID: k141_74986_35
Type: CAZyme
Location: 48704 - 52951 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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