Cluster: CGMR060950_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR060950
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_82692 | k141_82692_6 | 3572 | 6283 | - | GH3 |
| STP | k141_82692 | k141_82692_7 | 6505 | 7122 | + | TetR_N |
| pfam | k141_82692 | k141_82692_8 | 7166 | 7687 | - | Isochorismatase |
| TC | k141_82692 | k141_82692_9 | 7984 | 9801 | - | 3.A.1.33.1 |
| pfam | k141_82692 | k141_82692_10 | 9817 | 10584 | - | CbiQ |
| TC | k141_82692 | k141_82692_11 | 10610 | 11212 | - | 3.A.1.28.1 |
Gene ID: k141_82692_6
Type: CAZyme
Location: 3572 - 6283 (-)
Type: CAZyme
Location: 3572 - 6283 (-)
Gene ID: k141_82692_7
Type: STP
Location: 6505 - 7122 (+)
Type: STP
Location: 6505 - 7122 (+)
Gene ID: k141_82692_8
Type: pfam
Location: 7166 - 7687 (-)
Type: pfam
Location: 7166 - 7687 (-)
Gene ID: k141_82692_9
Type: TC
Location: 7984 - 9801 (-)
Type: TC
Location: 7984 - 9801 (-)
Gene ID: k141_82692_10
Type: pfam
Location: 9817 - 10584 (-)
Type: pfam
Location: 9817 - 10584 (-)
Gene ID: k141_82692_11
Type: TC
Location: 10610 - 11212 (-)
Type: TC
Location: 10610 - 11212 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900756925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.