dbCAN Logo

Cluster: CGMR060950_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_115255 k141_115255_4 3923 5665 - GH13_36
TC k141_115255 k141_115255_5 5786 6661 - 3.A.1.1.27
TC k141_115255 k141_115255_6 6661 8034 - 3.A.1.1.27
pfam k141_115255 k141_115255_7 8145 9431 - SBP_bac_1 | SBP_bac_8
CAZyme k141_115255 k141_115255_8 9499 10995 - GH77
TF k141_115255 k141_115255_9 11299 12309 + LacI
TC k141_115255 k141_115255_10 12363 14138 - 3.A.1.135.5
TC k141_115255 k141_115255_11 14139 15896 - 3.A.1.135.5
pfam k141_115255 k141_115255_12 15923 16801 - VCA0040-like
TC k141_115255 k141_115255_13 17014 17583 - 3.A.1.17.6
Gene ID: k141_115255_4
Type: CAZyme
Location: 3923 - 5665 (-)
Gene ID: k141_115255_5
Type: TC
Location: 5786 - 6661 (-)
Gene ID: k141_115255_6
Type: TC
Location: 6661 - 8034 (-)
Gene ID: k141_115255_7
Type: pfam
Location: 8145 - 9431 (-)
Gene ID: k141_115255_8
Type: CAZyme
Location: 9499 - 10995 (-)
Gene ID: k141_115255_9
Type: TF
Location: 11299 - 12309 (+)
Gene ID: k141_115255_10
Type: TC
Location: 12363 - 14138 (-)
Gene ID: k141_115255_11
Type: TC
Location: 14139 - 15896 (-)
Gene ID: k141_115255_12
Type: pfam
Location: 15923 - 16801 (-)
Gene ID: k141_115255_13
Type: TC
Location: 17014 - 17583 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_115255_4 vegetarian > vegan 1.09359 0.01882
k141_115255_9 vegetarian > vegan 1.27202 0.01882

🧭 Explore Read Mapping of CGC

← Back to Cluster List