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Cluster: CGMR060950_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_138200 k141_138200_5 5452 6699 + 9.A.40.2.4
TC k141_138200 k141_138200_6 6782 7966 + 2.A.86.1.8
pfam k141_138200 k141_138200_7 8236 10023 - DUF885
STP k141_138200 k141_138200_8 10311 10631 - Rhodanese
TC k141_138200 k141_138200_9 10738 12132 - 2.A.35.1.2
TC k141_138200 k141_138200_10 12398 13003 + 3.A.1.31.1
TC k141_138200 k141_138200_11 13000 13689 + 3.A.1.31.1
TC k141_138200 k141_138200_12 13792 15189 + 3.A.1.31.1
NULL(UNKNOWN) k141_138200 k141_138200_13 15289 15927 + NULL(UNKNOWN)
[View Structural Homologs]
STP k141_138200 k141_138200_14 16477 17067 - TetR_N
CAZyme k141_138200 k141_138200_15 17304 18890 + CE20 | CE20
Gene ID: k141_138200_5
Type: TC
Location: 5452 - 6699 (+)
Gene ID: k141_138200_6
Type: TC
Location: 6782 - 7966 (+)
Gene ID: k141_138200_7
Type: pfam
Location: 8236 - 10023 (-)
Gene ID: k141_138200_8
Type: STP
Location: 10311 - 10631 (-)
Gene ID: k141_138200_9
Type: TC
Location: 10738 - 12132 (-)
Gene ID: k141_138200_10
Type: TC
Location: 12398 - 13003 (+)
Gene ID: k141_138200_11
Type: TC
Location: 13000 - 13689 (+)
Gene ID: k141_138200_12
Type: TC
Location: 13792 - 15189 (+)
Gene ID: k141_138200_13
Type:
Location: 15289 - 15927 (+)
Gene ID: k141_138200_14
Type: STP
Location: 16477 - 17067 (-)
Gene ID: k141_138200_15
Type: CAZyme
Location: 17304 - 18890 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_138200_6 vegetarian > vegan 1.52801 0.01882

🧭 Explore Read Mapping of CGC

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