Cluster: CGMR060950_CGC20
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR060950
- CGC Family ID: CGCFAM_00050
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_36405 | k141_36405_11 | 9221 | 10207 | - | GT4 |
| pfam | k141_36405 | k141_36405_12 | 10208 | 11320 | - | PS_pyruv_trans |
| NULL(UNKNOWN) | k141_36405 | k141_36405_13 | 11350 | 12525 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_36405 | k141_36405_14 | 12547 | 13581 | - | GT2 |
| CAZyme | k141_36405 | k141_36405_15 | 13689 | 14381 | - | GT2 |
| pfam | k141_36405 | k141_36405_16 | 14520 | 15707 | - | Radical_SAM | SPASM |
| CAZyme | k141_36405 | k141_36405_17 | 15731 | 16930 | - | GT4 |
| CAZyme | k141_36405 | k141_36405_18 | 16971 | 18203 | - | GT4 |
| TC | k141_36405 | k141_36405_19 | 18288 | 19739 | - | 9.B.18.1.2 |
| pfam | k141_36405 | k141_36405_20 | 19791 | 21056 | - | Glyco_hydro_3 |
| TC | k141_36405 | k141_36405_21 | 21053 | 21793 | - | 8.A.3.2.2 |
| TC | k141_36405 | k141_36405_22 | 21812 | 22552 | - | 8.A.3.2.3 |
| pfam | k141_36405 | k141_36405_23 | 22596 | 23297 | - | PHP | CpsB_CapC |
| NULL(UNKNOWN) | k141_36405 | k141_36405_24 | 23644 | 24087 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_36405 | k141_36405_25 | 24162 | 25454 | - | 2.A.23.1.5 |
Gene ID: k141_36405_11
Type: CAZyme
Location: 9221 - 10207 (-)
Type: CAZyme
Location: 9221 - 10207 (-)
Gene ID: k141_36405_12
Type: pfam
Location: 10208 - 11320 (-)
Type: pfam
Location: 10208 - 11320 (-)
Gene ID: k141_36405_13
Type:
Location: 11350 - 12525 (-)
Type:
Location: 11350 - 12525 (-)
Gene ID: k141_36405_14
Type: CAZyme
Location: 12547 - 13581 (-)
Type: CAZyme
Location: 12547 - 13581 (-)
Gene ID: k141_36405_15
Type: CAZyme
Location: 13689 - 14381 (-)
Type: CAZyme
Location: 13689 - 14381 (-)
Gene ID: k141_36405_16
Type: pfam
Location: 14520 - 15707 (-)
Type: pfam
Location: 14520 - 15707 (-)
Gene ID: k141_36405_17
Type: CAZyme
Location: 15731 - 16930 (-)
Type: CAZyme
Location: 15731 - 16930 (-)
Gene ID: k141_36405_18
Type: CAZyme
Location: 16971 - 18203 (-)
Type: CAZyme
Location: 16971 - 18203 (-)
Gene ID: k141_36405_19
Type: TC
Location: 18288 - 19739 (-)
Type: TC
Location: 18288 - 19739 (-)
Gene ID: k141_36405_20
Type: pfam
Location: 19791 - 21056 (-)
Type: pfam
Location: 19791 - 21056 (-)
Gene ID: k141_36405_21
Type: TC
Location: 21053 - 21793 (-)
Type: TC
Location: 21053 - 21793 (-)
Gene ID: k141_36405_22
Type: TC
Location: 21812 - 22552 (-)
Type: TC
Location: 21812 - 22552 (-)
Gene ID: k141_36405_23
Type: pfam
Location: 22596 - 23297 (-)
Type: pfam
Location: 22596 - 23297 (-)
Gene ID: k141_36405_24
Type:
Location: 23644 - 24087 (-)
Type:
Location: 23644 - 24087 (-)
Gene ID: k141_36405_25
Type: TC
Location: 24162 - 25454 (-)
Type: TC
Location: 24162 - 25454 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900756925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.