Cluster: CGMR060950_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR060950
- CGC Family ID: CGCFAM_00951
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_62277 | k141_62277_33 | 27169 | 28902 | + | GH18 |
| pfam | k141_62277 | k141_62277_34 | 28966 | 29694 | + | Amidase_3 |
| CAZyme | k141_62277 | k141_62277_35 | 29810 | 31708 | - | CBM48 | GH13_9 |
| STP | k141_62277 | k141_62277_36 | 31780 | 34449 | - | TPR_2 |
| TC | k141_62277 | k141_62277_37 | 34541 | 35893 | - | 2.A.86.1.8 |
Gene ID: k141_62277_33
Type: CAZyme
Location: 27169 - 28902 (+)
Type: CAZyme
Location: 27169 - 28902 (+)
Gene ID: k141_62277_34
Type: pfam
Location: 28966 - 29694 (+)
Type: pfam
Location: 28966 - 29694 (+)
Gene ID: k141_62277_35
Type: CAZyme
Location: 29810 - 31708 (-)
Type: CAZyme
Location: 29810 - 31708 (-)
Gene ID: k141_62277_36
Type: STP
Location: 31780 - 34449 (-)
Type: STP
Location: 31780 - 34449 (-)
Gene ID: k141_62277_37
Type: TC
Location: 34541 - 35893 (-)
Type: TC
Location: 34541 - 35893 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900756925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.