Cluster: CGMR060950_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR060950
- CGC Family ID: CGCFAM_01886
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_62277 | k141_62277_9 | 7046 | 7972 | - | 8.A.21.2.2 |
| pfam | k141_62277 | k141_62277_10 | 8149 | 9420 | - | Hydrolase_2 | SH3_3 | SH3_3 |
| NULL(UNKNOWN) | k141_62277 | k141_62277_11 | 9563 | 9886 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_62277 | k141_62277_12 | 10116 | 11183 | + | GT28 |
| pfam | k141_62277 | k141_62277_13 | 11209 | 11625 | - | HIT | DcpS_C |
| STP | k141_62277 | k141_62277_14 | 11790 | 12440 | + | HATPase_c |
| TC | k141_62277 | k141_62277_15 | 12471 | 13520 | - | 9.B.104.1.3 |
Gene ID: k141_62277_9
Type: TC
Location: 7046 - 7972 (-)
Type: TC
Location: 7046 - 7972 (-)
Gene ID: k141_62277_10
Type: pfam
Location: 8149 - 9420 (-)
Type: pfam
Location: 8149 - 9420 (-)
Gene ID: k141_62277_11
Type:
Location: 9563 - 9886 (-)
Type:
Location: 9563 - 9886 (-)
Gene ID: k141_62277_12
Type: CAZyme
Location: 10116 - 11183 (+)
Type: CAZyme
Location: 10116 - 11183 (+)
Gene ID: k141_62277_13
Type: pfam
Location: 11209 - 11625 (-)
Type: pfam
Location: 11209 - 11625 (-)
Gene ID: k141_62277_14
Type: STP
Location: 11790 - 12440 (+)
Type: STP
Location: 11790 - 12440 (+)
Gene ID: k141_62277_15
Type: TC
Location: 12471 - 13520 (-)
Type: TC
Location: 12471 - 13520 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900756925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.