Cluster: CGMR060950_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR060950
- CGC Family ID: CGCFAM_02175
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_16262 | k141_16262_1 | 3 | 170 | - | 3.A.1.124.6 |
| pfam | k141_16262 | k141_16262_2 | 798 | 2261 | + | MFS_2 |
| TF | k141_16262 | k141_16262_3 | 2270 | 3283 | - | HTH_AraC |
| CAZyme | k141_16262 | k141_16262_4 | 3361 | 4815 | + | GH43_35 |
| pfam | k141_16262 | k141_16262_5 | 4836 | 5963 | + | Lipase_GDSL | Lipase_GDSL_2 |
| CAZyme | k141_16262 | k141_16262_6 | 5963 | 6703 | + | CE4 |
| CAZyme | k141_16262 | k141_16262_7 | 6749 | 9151 | + | GH2 |
Gene ID: k141_16262_1
Type: TC
Location: 3 - 170 (-)
Type: TC
Location: 3 - 170 (-)
Gene ID: k141_16262_2
Type: pfam
Location: 798 - 2261 (+)
Type: pfam
Location: 798 - 2261 (+)
Gene ID: k141_16262_3
Type: TF
Location: 2270 - 3283 (-)
Type: TF
Location: 2270 - 3283 (-)
Gene ID: k141_16262_4
Type: CAZyme
Location: 3361 - 4815 (+)
Type: CAZyme
Location: 3361 - 4815 (+)
Gene ID: k141_16262_5
Type: pfam
Location: 4836 - 5963 (+)
Type: pfam
Location: 4836 - 5963 (+)
Gene ID: k141_16262_6
Type: CAZyme
Location: 5963 - 6703 (+)
Type: CAZyme
Location: 5963 - 6703 (+)
Gene ID: k141_16262_7
Type: CAZyme
Location: 6749 - 9151 (+)
Type: CAZyme
Location: 6749 - 9151 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900756925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.