Cluster: CGMR060950_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR060950
- CGC Family ID: CGCFAM_08790
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_181933 | k141_181933_31 | 36995 | 38269 | + | 2.A.1.2.88 |
| pfam | k141_181933 | k141_181933_32 | 38373 | 39188 | + | GDPD |
| CAZyme | k141_181933 | k141_181933_33 | 39372 | 41765 | - | GH2 |
| TF | k141_181933 | k141_181933_34 | 41931 | 43010 | + | HTH_AraC |
| TF | k141_181933 | k141_181933_35 | 42983 | 43993 | - | HTH_AraC |
| CAZyme | k141_181933 | k141_181933_36 | 44577 | 46061 | + | GH30_1 |
Gene ID: k141_181933_31
Type: TC
Location: 36995 - 38269 (+)
Type: TC
Location: 36995 - 38269 (+)
Gene ID: k141_181933_32
Type: pfam
Location: 38373 - 39188 (+)
Type: pfam
Location: 38373 - 39188 (+)
Gene ID: k141_181933_33
Type: CAZyme
Location: 39372 - 41765 (-)
Type: CAZyme
Location: 39372 - 41765 (-)
Gene ID: k141_181933_34
Type: TF
Location: 41931 - 43010 (+)
Type: TF
Location: 41931 - 43010 (+)
Gene ID: k141_181933_35
Type: TF
Location: 42983 - 43993 (-)
Type: TF
Location: 42983 - 43993 (-)
Gene ID: k141_181933_36
Type: CAZyme
Location: 44577 - 46061 (+)
Type: CAZyme
Location: 44577 - 46061 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900756925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.