Cluster: CGMR060950_CGC10
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR060950
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_123281 | k141_123281_68 | 81164 | 82819 | - | 3.A.1.135.9 |
| NULL(UNKNOWN) | k141_123281 | k141_123281_69 | 82809 | 84113 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_123281 | k141_123281_70 | 84454 | 86763 | - | CBM20 | CBM20 | GH13_1 |
| CAZyme | k141_123281 | k141_123281_71 | 86793 | 88514 | - | CBM34 | GH13_20 |
| TC | k141_123281 | k141_123281_72 | 88540 | 89394 | - | 3.A.1.1.44 |
| TC | k141_123281 | k141_123281_73 | 89397 | 90284 | - | 3.A.1.1.2 |
| TC | k141_123281 | k141_123281_74 | 90404 | 91693 | - | 3.A.1.1.2 |
| TF | k141_123281 | k141_123281_75 | 91918 | 92928 | + | LacI |
| CAZyme | k141_123281 | k141_123281_76 | 93067 | 95664 | + | GH3 |
| NULL(UNKNOWN) | k141_123281 | k141_123281_77 | 95766 | 95864 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_123281 | k141_123281_78 | 96152 | 96556 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_123281 | k141_123281_79 | 96399 | 97202 | - | CE1 |
| TC | k141_123281 | k141_123281_80 | 97234 | 98124 | - | 3.A.1.1.29 |
| TC | k141_123281 | k141_123281_81 | 98139 | 99071 | - | 3.A.1.1.10 |
Gene ID: k141_123281_68
Type: TC
Location: 81164 - 82819 (-)
Type: TC
Location: 81164 - 82819 (-)
Gene ID: k141_123281_69
Type:
Location: 82809 - 84113 (-)
Type:
Location: 82809 - 84113 (-)
Gene ID: k141_123281_70
Type: CAZyme
Location: 84454 - 86763 (-)
Type: CAZyme
Location: 84454 - 86763 (-)
Gene ID: k141_123281_71
Type: CAZyme
Location: 86793 - 88514 (-)
Type: CAZyme
Location: 86793 - 88514 (-)
Gene ID: k141_123281_72
Type: TC
Location: 88540 - 89394 (-)
Type: TC
Location: 88540 - 89394 (-)
Gene ID: k141_123281_73
Type: TC
Location: 89397 - 90284 (-)
Type: TC
Location: 89397 - 90284 (-)
Gene ID: k141_123281_74
Type: TC
Location: 90404 - 91693 (-)
Type: TC
Location: 90404 - 91693 (-)
Gene ID: k141_123281_75
Type: TF
Location: 91918 - 92928 (+)
Type: TF
Location: 91918 - 92928 (+)
Gene ID: k141_123281_76
Type: CAZyme
Location: 93067 - 95664 (+)
Type: CAZyme
Location: 93067 - 95664 (+)
Gene ID: k141_123281_77
Type:
Location: 95766 - 95864 (-)
Type:
Location: 95766 - 95864 (-)
Gene ID: k141_123281_78
Type:
Location: 96152 - 96556 (+)
Type:
Location: 96152 - 96556 (+)
Gene ID: k141_123281_79
Type: CAZyme
Location: 96399 - 97202 (-)
Type: CAZyme
Location: 96399 - 97202 (-)
Gene ID: k141_123281_80
Type: TC
Location: 97234 - 98124 (-)
Type: TC
Location: 97234 - 98124 (-)
Gene ID: k141_123281_81
Type: TC
Location: 98139 - 99071 (-)
Type: TC
Location: 98139 - 99071 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900756925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.