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Cluster: CGMR060930_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_160366 k141_160366_3 1896 6143 - GT3 | GT35
CAZyme k141_160366 k141_160366_4 6199 7392 - GH57
CAZyme k141_160366 k141_160366_5 7394 8857 - GT4
CAZyme k141_160366 k141_160366_6 8857 10905 - GH133
pfam k141_160366 k141_160366_7 11162 13240 - HD_5
peptidase k141_160366 k141_160366_8 13244 13996 - C93.UPW
TC k141_160366 k141_160366_9 14613 16880 + 3.A.1.109.3
TC k141_160366 k141_160366_10 16867 18537 + 3.A.1.109.4
TC k141_160366 k141_160366_11 18558 20627 + 8.A.59.4.2
NULL(UNKNOWN) k141_160366 k141_160366_12 20717 21313 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_160366 k141_160366_13 21522 21929 + 3.D.1.9.2
TC k141_160366 k141_160366_14 21978 23552 + 3.D.1.9.2
pfam k141_160366 k141_160366_15 23556 25475 + NAD_binding_1 | FAD_binding_6 | DHODB_Fe-S_bind | Fer4_22
TC k141_160366 k141_160366_16 26001 26855 - 2.A.7.3.6
Gene ID: k141_160366_3
Type: CAZyme
Location: 1896 - 6143 (-)
Gene ID: k141_160366_4
Type: CAZyme
Location: 6199 - 7392 (-)
Gene ID: k141_160366_5
Type: CAZyme
Location: 7394 - 8857 (-)
Gene ID: k141_160366_6
Type: CAZyme
Location: 8857 - 10905 (-)
Gene ID: k141_160366_7
Type: pfam
Location: 11162 - 13240 (-)
Gene ID: k141_160366_8
Type: peptidase
Location: 13244 - 13996 (-)
Gene ID: k141_160366_9
Type: TC
Location: 14613 - 16880 (+)
Gene ID: k141_160366_10
Type: TC
Location: 16867 - 18537 (+)
Gene ID: k141_160366_11
Type: TC
Location: 18558 - 20627 (+)
Gene ID: k141_160366_12
Type:
Location: 20717 - 21313 (-)
Gene ID: k141_160366_13
Type: TC
Location: 21522 - 21929 (+)
Gene ID: k141_160366_14
Type: TC
Location: 21978 - 23552 (+)
Gene ID: k141_160366_15
Type: pfam
Location: 23556 - 25475 (+)
Gene ID: k141_160366_16
Type: TC
Location: 26001 - 26855 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_160366_4 vegetarian > vegan 1.20253 0.04492
k141_160366_7 vegetarian > vegan 1.32539 0.04492
k141_160366_8 vegetarian > vegan 1.03040 0.04492

🧭 Explore Read Mapping of CGC

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