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Cluster: CGMR060701_CGC72

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_7119 k141_7119_33 32477 34912 + GH3
STP k141_7119 k141_7119_34 34955 36319 + SBP_bac_1
TC k141_7119 k141_7119_35 36330 37226 + 3.A.1.1.28
TC k141_7119 k141_7119_36 37229 38071 + 3.A.1.1.25
STP k141_7119 k141_7119_37 38124 39329 - ATPase_2
CAZyme k141_7119 k141_7119_38 39519 40442 - GH43_32
STP k141_7119 k141_7119_39 40479 41828 - SBP_bac_1
TF k141_7119 k141_7119_40 41933 42781 + HTH_AraC
TC k141_7119 k141_7119_41 42805 43674 + 3.A.1.1.25
TC k141_7119 k141_7119_42 43674 44504 + 3.A.1.1.47
pfam k141_7119 k141_7119_43 44551 45735 + MFS_1
pfam k141_7119 k141_7119_44 45710 46720 + PHP
TC k141_7119 k141_7119_45 46842 47465 - 3.A.2.3.2
TC k141_7119 k141_7119_46 47483 48877 - 3.A.2.3.3
TC k141_7119 k141_7119_47 48889 50655 - 3.A.2.3.1
Gene ID: k141_7119_33
Type: CAZyme
Location: 32477 - 34912 (+)
Gene ID: k141_7119_34
Type: STP
Location: 34955 - 36319 (+)
Gene ID: k141_7119_35
Type: TC
Location: 36330 - 37226 (+)
Gene ID: k141_7119_36
Type: TC
Location: 37229 - 38071 (+)
Gene ID: k141_7119_37
Type: STP
Location: 38124 - 39329 (-)
Gene ID: k141_7119_38
Type: CAZyme
Location: 39519 - 40442 (-)
Gene ID: k141_7119_39
Type: STP
Location: 40479 - 41828 (-)
Gene ID: k141_7119_40
Type: TF
Location: 41933 - 42781 (+)
Gene ID: k141_7119_41
Type: TC
Location: 42805 - 43674 (+)
Gene ID: k141_7119_42
Type: TC
Location: 43674 - 44504 (+)
Gene ID: k141_7119_43
Type: pfam
Location: 44551 - 45735 (+)
Gene ID: k141_7119_44
Type: pfam
Location: 45710 - 46720 (+)
Gene ID: k141_7119_45
Type: TC
Location: 46842 - 47465 (-)
Gene ID: k141_7119_46
Type: TC
Location: 47483 - 48877 (-)
Gene ID: k141_7119_47
Type: TC
Location: 48889 - 50655 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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