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Cluster: CGMR060701_CGC68

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_69818 k141_69818_233 245335 246522 - CE9
TF k141_69818 k141_69818_234 246558 247202 - GntR
pfam k141_69818 k141_69818_235 247438 248721 + GlcNAc_2-epim
TC k141_69818 k141_69818_236 248745 249650 + 3.A.1.1.34
TC k141_69818 k141_69818_237 249678 250517 + 3.A.1.1.11
STP k141_69818 k141_69818_238 250608 251990 + SBP_bac_1
CAZyme k141_69818 k141_69818_239 252015 253883 + GH163
TF k141_69818 k141_69818_240 253949 254677 - GntR
STP k141_69818 k141_69818_241 254938 256257 + SBP_bac_1
TC k141_69818 k141_69818_242 256272 257159 + 3.A.1.1.32
TC k141_69818 k141_69818_243 257161 257997 + 3.A.1.1.6
pfam k141_69818 k141_69818_244 258008 258910 + ROK
CAZyme k141_69818 k141_69818_245 258916 260304 + GH1
Gene ID: k141_69818_233
Type: CAZyme
Location: 245335 - 246522 (-)
Gene ID: k141_69818_234
Type: TF
Location: 246558 - 247202 (-)
Gene ID: k141_69818_235
Type: pfam
Location: 247438 - 248721 (+)
Gene ID: k141_69818_236
Type: TC
Location: 248745 - 249650 (+)
Gene ID: k141_69818_237
Type: TC
Location: 249678 - 250517 (+)
Gene ID: k141_69818_238
Type: STP
Location: 250608 - 251990 (+)
Gene ID: k141_69818_239
Type: CAZyme
Location: 252015 - 253883 (+)
Gene ID: k141_69818_240
Type: TF
Location: 253949 - 254677 (-)
Gene ID: k141_69818_241
Type: STP
Location: 254938 - 256257 (+)
Gene ID: k141_69818_242
Type: TC
Location: 256272 - 257159 (+)
Gene ID: k141_69818_243
Type: TC
Location: 257161 - 257997 (+)
Gene ID: k141_69818_244
Type: pfam
Location: 258008 - 258910 (+)
Gene ID: k141_69818_245
Type: CAZyme
Location: 258916 - 260304 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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