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Cluster: CGMR060701_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_23555 k141_23555_22 22652 24985 - GH65
CAZyme k141_23555 k141_23555_23 25011 26645 - GH13_31
STP k141_23555 k141_23555_24 26713 28050 - SBP_bac_1
TC k141_23555 k141_23555_25 28092 28913 - 3.A.1.1.34
TC k141_23555 k141_23555_26 28928 29830 - 3.A.1.1.25
CAZyme k141_23555 k141_23555_27 29843 31519 - GH13_31
TF k141_23555 k141_23555_28 31752 32762 + LacI
TC k141_23555 k141_23555_29 32842 33159 - 4.A.3.2.9
TC k141_23555 k141_23555_30 33156 33455 - 4.A.3.2.6
TC k141_23555 k141_23555_31 33477 34739 - 4.A.3.2.6
CAZyme k141_23555 k141_23555_32 34755 36131 - GH1
Gene ID: k141_23555_22
Type: CAZyme
Location: 22652 - 24985 (-)
Gene ID: k141_23555_23
Type: CAZyme
Location: 25011 - 26645 (-)
Gene ID: k141_23555_24
Type: STP
Location: 26713 - 28050 (-)
Gene ID: k141_23555_25
Type: TC
Location: 28092 - 28913 (-)
Gene ID: k141_23555_26
Type: TC
Location: 28928 - 29830 (-)
Gene ID: k141_23555_27
Type: CAZyme
Location: 29843 - 31519 (-)
Gene ID: k141_23555_28
Type: TF
Location: 31752 - 32762 (+)
Gene ID: k141_23555_29
Type: TC
Location: 32842 - 33159 (-)
Gene ID: k141_23555_30
Type: TC
Location: 33156 - 33455 (-)
Gene ID: k141_23555_31
Type: TC
Location: 33477 - 34739 (-)
Gene ID: k141_23555_32
Type: CAZyme
Location: 34755 - 36131 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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