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Cluster: CGMR060701_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_55438 k141_55438_1 61 1167 + GH177
STP k141_55438 k141_55438_2 1234 2481 + Aminotran_1_2
pfam k141_55438 k141_55438_3 2638 3396 + TraX
TC k141_55438 k141_55438_4 3406 4923 + 8.A.59.2.1
TF k141_55438 k141_55438_5 4926 5765 + HTH_AraC | HTH_AraC
TC k141_55438 k141_55438_6 5958 7061 + 2.A.56.1.6
pfam k141_55438 k141_55438_7 7158 7679 + DctQ
TC k141_55438 k141_55438_8 7683 8975 + 2.A.56.1.5
TC k141_55438 k141_55438_9 9134 10096 + 2.A.56.1.5
Gene ID: k141_55438_1
Type: CAZyme
Location: 61 - 1167 (+)
Gene ID: k141_55438_2
Type: STP
Location: 1234 - 2481 (+)
Gene ID: k141_55438_3
Type: pfam
Location: 2638 - 3396 (+)
Gene ID: k141_55438_4
Type: TC
Location: 3406 - 4923 (+)
Gene ID: k141_55438_5
Type: TF
Location: 4926 - 5765 (+)
Gene ID: k141_55438_6
Type: TC
Location: 5958 - 7061 (+)
Gene ID: k141_55438_7
Type: pfam
Location: 7158 - 7679 (+)
Gene ID: k141_55438_8
Type: TC
Location: 7683 - 8975 (+)
Gene ID: k141_55438_9
Type: TC
Location: 9134 - 10096 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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