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Cluster: CGMR060701_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_77512 k141_77512_1 1 1899 + GH78
CAZyme k141_77512 k141_77512_2 1893 3890 + GH127
CAZyme k141_77512 k141_77512_3 3957 6080 + GH42
TC k141_77512 k141_77512_4 6193 8049 + 8.A.59.2.1
TF k141_77512 k141_77512_5 8057 9088 + HTH_AraC | HTH_AraC
STP k141_77512 k141_77512_6 9235 10617 + SBP_bac_1
TC k141_77512 k141_77512_7 10778 11656 + 3.A.1.1.17
TC k141_77512 k141_77512_8 11669 12499 + 3.A.1.1.18
CAZyme k141_77512 k141_77512_9 12535 13824 + GH175
CAZyme k141_77512 k141_77512_10 13826 15250 + GH140
Gene ID: k141_77512_1
Type: CAZyme
Location: 1 - 1899 (+)
Gene ID: k141_77512_2
Type: CAZyme
Location: 1893 - 3890 (+)
Gene ID: k141_77512_3
Type: CAZyme
Location: 3957 - 6080 (+)
Gene ID: k141_77512_4
Type: TC
Location: 6193 - 8049 (+)
Gene ID: k141_77512_5
Type: TF
Location: 8057 - 9088 (+)
Gene ID: k141_77512_6
Type: STP
Location: 9235 - 10617 (+)
Gene ID: k141_77512_7
Type: TC
Location: 10778 - 11656 (+)
Gene ID: k141_77512_8
Type: TC
Location: 11669 - 12499 (+)
Gene ID: k141_77512_9
Type: CAZyme
Location: 12535 - 13824 (+)
Gene ID: k141_77512_10
Type: CAZyme
Location: 13826 - 15250 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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