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Cluster: CGMR060701_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_44609 k141_44609_64 66242 66607 + 9.B.55.2.1
pfam k141_44609 k141_44609_65 66748 66954 + SASP
CAZyme k141_44609 k141_44609_66 67013 68035 - GH179
pfam k141_44609 k141_44609_67 68109 69290 - ROK
TC k141_44609 k141_44609_68 69505 70437 + 3.A.1.1.28
TC k141_44609 k141_44609_69 70446 71285 + 3.A.1.1.24
pfam k141_44609 k141_44609_70 71304 72173 + AP_endonuc_2
CAZyme k141_44609 k141_44609_71 72183 73283 + GH179
Gene ID: k141_44609_64
Type: TC
Location: 66242 - 66607 (+)
Gene ID: k141_44609_65
Type: pfam
Location: 66748 - 66954 (+)
Gene ID: k141_44609_66
Type: CAZyme
Location: 67013 - 68035 (-)
Gene ID: k141_44609_67
Type: pfam
Location: 68109 - 69290 (-)
Gene ID: k141_44609_68
Type: TC
Location: 69505 - 70437 (+)
Gene ID: k141_44609_69
Type: TC
Location: 70446 - 71285 (+)
Gene ID: k141_44609_70
Type: pfam
Location: 71304 - 72173 (+)
Gene ID: k141_44609_71
Type: CAZyme
Location: 72183 - 73283 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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