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Cluster: CGMR060701_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_24996 k141_24996_5 14629 15708 - GH88
CAZyme k141_24996 k141_24996_6 15791 17827 - PL12
STP k141_24996 k141_24996_7 17919 19610 - HATPase_c
TF k141_24996 k141_24996_8 19626 21131 - HTH_AraC
CAZyme k141_24996 k141_24996_9 21162 23051 - PL33_1
TC k141_24996 k141_24996_10 23108 24616 - 3.A.1.1.9
TC k141_24996 k141_24996_11 24636 25487 - 3.A.1.1.29
TC k141_24996 k141_24996_12 25499 26425 - 3.A.1.1.10
pfam k141_24996 k141_24996_13 26487 27404 - AP_endonuc_2
TC k141_24996 k141_24996_14 27367 28716 - 2.A.66.1.22
NULL(UNKNOWN) k141_24996 k141_24996_15 28914 29090 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_24996 k141_24996_16 29334 29600 + HTH_26
TC k141_24996 k141_24996_17 29663 31321 - 2.A.37.3.3
Gene ID: k141_24996_5
Type: CAZyme
Location: 14629 - 15708 (-)
Gene ID: k141_24996_6
Type: CAZyme
Location: 15791 - 17827 (-)
Gene ID: k141_24996_7
Type: STP
Location: 17919 - 19610 (-)
Gene ID: k141_24996_8
Type: TF
Location: 19626 - 21131 (-)
Gene ID: k141_24996_9
Type: CAZyme
Location: 21162 - 23051 (-)
Gene ID: k141_24996_10
Type: TC
Location: 23108 - 24616 (-)
Gene ID: k141_24996_11
Type: TC
Location: 24636 - 25487 (-)
Gene ID: k141_24996_12
Type: TC
Location: 25499 - 26425 (-)
Gene ID: k141_24996_13
Type: pfam
Location: 26487 - 27404 (-)
Gene ID: k141_24996_14
Type: TC
Location: 27367 - 28716 (-)
Gene ID: k141_24996_15
Type:
Location: 28914 - 29090 (-)
Gene ID: k141_24996_16
Type: pfam
Location: 29334 - 29600 (+)
Gene ID: k141_24996_17
Type: TC
Location: 29663 - 31321 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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