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Cluster: CGMR060701_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_109805 k141_109805_25 22978 24525 - 2.A.2.3.5
NULL(UNKNOWN) k141_109805 k141_109805_26 24539 24982 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_109805 k141_109805_27 24983 28240 - GH3
CAZyme k141_109805 k141_109805_28 28308 30251 - GH2
pfam k141_109805 k141_109805_29 30417 31688 - HATPase_c_5
TF k141_109805 k141_109805_30 31688 32395 - LytTR
TC k141_109805 k141_109805_31 32757 33692 - 2.A.19.5.2
TF k141_109805 k141_109805_32 33963 34658 - GerE
STP k141_109805 k141_109805_33 34658 36148 - HATPase_c
TC k141_109805 k141_109805_34 36238 37254 - 3.A.1.17.12
TC k141_109805 k141_109805_35 37271 38059 - 3.A.1.17.5
TC k141_109805 k141_109805_36 38082 38846 - 3.A.1.16.2
TC k141_109805 k141_109805_37 38834 39598 - 3.A.1.17.1
TC k141_109805 k141_109805_38 39595 40407 - 3.A.1.17.1
pfam k141_109805 k141_109805_39 40426 41646 - NMT1
pfam k141_109805 k141_109805_40 41731 42477 - SIS_2
TC k141_109805 k141_109805_41 42590 44005 - 2.A.25.1.9
pfam k141_109805 k141_109805_42 44123 45100 + Zn_dep_PLPC
NULL(UNKNOWN) k141_109805 k141_109805_43 45226 45735 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_109805 k141_109805_44 45919 47481 + 2.A.15.2.2
TF k141_109805 k141_109805_45 47552 47791 - HTH_3
CAZyme k141_109805 k141_109805_46 47938 48867 - GT2
Gene ID: k141_109805_25
Type: TC
Location: 22978 - 24525 (-)
Gene ID: k141_109805_26
Type:
Location: 24539 - 24982 (-)
Gene ID: k141_109805_27
Type: CAZyme
Location: 24983 - 28240 (-)
Gene ID: k141_109805_28
Type: CAZyme
Location: 28308 - 30251 (-)
Gene ID: k141_109805_29
Type: pfam
Location: 30417 - 31688 (-)
Gene ID: k141_109805_30
Type: TF
Location: 31688 - 32395 (-)
Gene ID: k141_109805_31
Type: TC
Location: 32757 - 33692 (-)
Gene ID: k141_109805_32
Type: TF
Location: 33963 - 34658 (-)
Gene ID: k141_109805_33
Type: STP
Location: 34658 - 36148 (-)
Gene ID: k141_109805_34
Type: TC
Location: 36238 - 37254 (-)
Gene ID: k141_109805_35
Type: TC
Location: 37271 - 38059 (-)
Gene ID: k141_109805_36
Type: TC
Location: 38082 - 38846 (-)
Gene ID: k141_109805_37
Type: TC
Location: 38834 - 39598 (-)
Gene ID: k141_109805_38
Type: TC
Location: 39595 - 40407 (-)
Gene ID: k141_109805_39
Type: pfam
Location: 40426 - 41646 (-)
Gene ID: k141_109805_40
Type: pfam
Location: 41731 - 42477 (-)
Gene ID: k141_109805_41
Type: TC
Location: 42590 - 44005 (-)
Gene ID: k141_109805_42
Type: pfam
Location: 44123 - 45100 (+)
Gene ID: k141_109805_43
Type:
Location: 45226 - 45735 (-)
Gene ID: k141_109805_44
Type: TC
Location: 45919 - 47481 (+)
Gene ID: k141_109805_45
Type: TF
Location: 47552 - 47791 (-)
Gene ID: k141_109805_46
Type: CAZyme
Location: 47938 - 48867 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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