Cluster: CGMR060615_CGC46
🧬 Cluster Details
- Gene Count: 21
- CAZyme Count: 10
- Substrate:
- Genome ID: CGMR060615
- CGC Family ID: CGCFAM_02278
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_248108 | k141_248108_3 | 1510 | 3432 | + | 1.I.1.1.3 |
| TF | k141_248108 | k141_248108_4 | 3695 | 7786 | - | HTH_AraC | HTH_AraC |
| CAZyme | k141_248108 | k141_248108_5 | 8063 | 9250 | + | GH76 |
| CAZyme | k141_248108 | k141_248108_6 | 9362 | 11401 | + | GH127 |
| CAZyme | k141_248108 | k141_248108_7 | 11843 | 13795 | + | GH97 |
| CAZyme | k141_248108 | k141_248108_8 | 13881 | 15200 | - | GH109 |
| CAZyme | k141_248108 | k141_248108_9 | 15537 | 16658 | + | GH43_33 |
| NULL(UNKNOWN) | k141_248108 | k141_248108_10 | 16904 | 17098 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_248108 | k141_248108_11 | 17155 | 19773 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_248108 | k141_248108_12 | 19917 | 22079 | + | GH92 |
| pfam | k141_248108 | k141_248108_13 | 22104 | 23939 | + | GxGYxYP_C | GxGYxYP_N_3rd |
| pfam | k141_248108 | k141_248108_14 | 24228 | 25601 | + | TIG |
| TC | k141_248108 | k141_248108_15 | 25653 | 28751 | + | 1.B.14.6.1 |
| pfam | k141_248108 | k141_248108_16 | 28765 | 30744 | + | SusD_RagB | SusD-like_3 |
| pfam | k141_248108 | k141_248108_17 | 30762 | 31709 | + | BT_3987-like_N | BT_3044-like_C | DUF4973 |
| CAZyme | k141_248108 | k141_248108_18 | 31739 | 34111 | + | GH3 |
| CAZyme | k141_248108 | k141_248108_19 | 34147 | 37314 | + | GH38 |
| CAZyme | k141_248108 | k141_248108_20 | 37470 | 41729 | - | CBM32 | CBM32 | GH2 |
| CAZyme | k141_248108 | k141_248108_21 | 42795 | 44558 | + | GH2 |
| peptidase | k141_248108 | k141_248108_22 | 44745 | 46886 | - | S46.001 |
| TC | k141_248108 | k141_248108_23 | 46997 | 48352 | - | 9.B.145.1.2 |
Gene ID: k141_248108_3
Type: TC
Location: 1510 - 3432 (+)
Type: TC
Location: 1510 - 3432 (+)
Gene ID: k141_248108_4
Type: TF
Location: 3695 - 7786 (-)
Type: TF
Location: 3695 - 7786 (-)
Gene ID: k141_248108_5
Type: CAZyme
Location: 8063 - 9250 (+)
Type: CAZyme
Location: 8063 - 9250 (+)
Gene ID: k141_248108_6
Type: CAZyme
Location: 9362 - 11401 (+)
Type: CAZyme
Location: 9362 - 11401 (+)
Gene ID: k141_248108_7
Type: CAZyme
Location: 11843 - 13795 (+)
Type: CAZyme
Location: 11843 - 13795 (+)
Gene ID: k141_248108_8
Type: CAZyme
Location: 13881 - 15200 (-)
Type: CAZyme
Location: 13881 - 15200 (-)
Gene ID: k141_248108_9
Type: CAZyme
Location: 15537 - 16658 (+)
Type: CAZyme
Location: 15537 - 16658 (+)
Gene ID: k141_248108_10
Type:
Location: 16904 - 17098 (+)
Type:
Location: 16904 - 17098 (+)
Gene ID: k141_248108_11
Type:
Location: 17155 - 19773 (-)
Type:
Location: 17155 - 19773 (-)
Gene ID: k141_248108_12
Type: CAZyme
Location: 19917 - 22079 (+)
Type: CAZyme
Location: 19917 - 22079 (+)
Gene ID: k141_248108_13
Type: pfam
Location: 22104 - 23939 (+)
Type: pfam
Location: 22104 - 23939 (+)
Gene ID: k141_248108_14
Type: pfam
Location: 24228 - 25601 (+)
Type: pfam
Location: 24228 - 25601 (+)
Gene ID: k141_248108_15
Type: TC
Location: 25653 - 28751 (+)
Type: TC
Location: 25653 - 28751 (+)
Gene ID: k141_248108_16
Type: pfam
Location: 28765 - 30744 (+)
Type: pfam
Location: 28765 - 30744 (+)
Gene ID: k141_248108_17
Type: pfam
Location: 30762 - 31709 (+)
Type: pfam
Location: 30762 - 31709 (+)
Gene ID: k141_248108_18
Type: CAZyme
Location: 31739 - 34111 (+)
Type: CAZyme
Location: 31739 - 34111 (+)
Gene ID: k141_248108_19
Type: CAZyme
Location: 34147 - 37314 (+)
Type: CAZyme
Location: 34147 - 37314 (+)
Gene ID: k141_248108_20
Type: CAZyme
Location: 37470 - 41729 (-)
Type: CAZyme
Location: 37470 - 41729 (-)
Gene ID: k141_248108_21
Type: CAZyme
Location: 42795 - 44558 (+)
Type: CAZyme
Location: 42795 - 44558 (+)
Gene ID: k141_248108_22
Type: peptidase
Location: 44745 - 46886 (-)
Type: peptidase
Location: 44745 - 46886 (-)
Gene ID: k141_248108_23
Type: TC
Location: 46997 - 48352 (-)
Type: TC
Location: 46997 - 48352 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides bouchesdurhonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_248108_10 | vegan > omnivore | 1.92647 | 0.00701 |
| k141_248108_10 | vegetarian > omnivore | 1.93337 | 0.02695 |