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Cluster: CGMR060615_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_342598 k141_342598_14 15538 16848 + 2.A.1.7.5
pfam k141_342598 k141_342598_15 16944 17639 + DNA_alkylation
TC k141_342598 k141_342598_16 17903 19237 - 3.A.1.11.8
TC k141_342598 k141_342598_17 19269 20066 - 3.A.1.11.8
TC k141_342598 k141_342598_18 20060 20857 - 3.A.1.11.8
TC k141_342598 k141_342598_19 20869 22260 - 3.A.1.11.8
pfam k141_342598 k141_342598_20 22399 23499 + Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_2 | Thioredoxin_8 | DUF4369
CAZyme k141_342598 k141_342598_21 23656 26220 - GT35
CAZyme k141_342598 k141_342598_22 26259 27920 - GT3
TC k141_342598 k141_342598_23 28123 28584 - 3.A.2.2.2
TC k141_342598 k141_342598_24 28671 30488 - 3.A.2.2.2
pfam k141_342598 k141_342598_25 30485 31090 - ATP-synt_D
TC k141_342598 k141_342598_26 31128 32453 - 3.A.2.3.3
TC k141_342598 k141_342598_27 32497 34251 - 3.A.2.3.3
Gene ID: k141_342598_14
Type: TC
Location: 15538 - 16848 (+)
Gene ID: k141_342598_15
Type: pfam
Location: 16944 - 17639 (+)
Gene ID: k141_342598_16
Type: TC
Location: 17903 - 19237 (-)
Gene ID: k141_342598_17
Type: TC
Location: 19269 - 20066 (-)
Gene ID: k141_342598_18
Type: TC
Location: 20060 - 20857 (-)
Gene ID: k141_342598_19
Type: TC
Location: 20869 - 22260 (-)
Gene ID: k141_342598_20
Type: pfam
Location: 22399 - 23499 (+)
Gene ID: k141_342598_21
Type: CAZyme
Location: 23656 - 26220 (-)
Gene ID: k141_342598_22
Type: CAZyme
Location: 26259 - 27920 (-)
Gene ID: k141_342598_23
Type: TC
Location: 28123 - 28584 (-)
Gene ID: k141_342598_24
Type: TC
Location: 28671 - 30488 (-)
Gene ID: k141_342598_25
Type: pfam
Location: 30485 - 31090 (-)
Gene ID: k141_342598_26
Type: TC
Location: 31128 - 32453 (-)
Gene ID: k141_342598_27
Type: TC
Location: 32497 - 34251 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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