Cluster: CGMR060252_CGC15
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR060252
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_317419 | k141_317419_2 | 499 | 1398 | - | 1.B.52.2.1 |
| STP | k141_317419 | k141_317419_3 | 1431 | 2507 | - | dCache_1 |
| TC | k141_317419 | k141_317419_4 | 2712 | 3470 | - | 3.A.1.3.20 |
| TC | k141_317419 | k141_317419_5 | 3471 | 4196 | - | 3.A.1.3.20 |
| TC | k141_317419 | k141_317419_6 | 4220 | 5029 | - | 3.A.1.3.20 |
| pfam | k141_317419 | k141_317419_7 | 5383 | 6231 | - | Carb_kinase |
| pfam | k141_317419 | k141_317419_8 | 6428 | 7441 | + | LytR_cpsA_psr |
| CAZyme | k141_317419 | k141_317419_9 | 7491 | 10460 | - | GH73 |
| pfam | k141_317419 | k141_317419_10 | 10586 | 11734 | - | Epimerase_2 |
| pfam | k141_317419 | k141_317419_11 | 11737 | 13047 | - | Wzy_C |
| CAZyme | k141_317419 | k141_317419_12 | 13060 | 14184 | - | GT4 |
| pfam | k141_317419 | k141_317419_13 | 14191 | 15456 | - | UDPG_MGDP_dh | ApbA | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| pfam | k141_317419 | k141_317419_14 | 15688 | 16320 | - | PglD_N |
| TC | k141_317419 | k141_317419_15 | 16353 | 16964 | - | 9.B.18.1.2 |
Gene ID: k141_317419_2
Type: TC
Location: 499 - 1398 (-)
Type: TC
Location: 499 - 1398 (-)
Gene ID: k141_317419_3
Type: STP
Location: 1431 - 2507 (-)
Type: STP
Location: 1431 - 2507 (-)
Gene ID: k141_317419_4
Type: TC
Location: 2712 - 3470 (-)
Type: TC
Location: 2712 - 3470 (-)
Gene ID: k141_317419_5
Type: TC
Location: 3471 - 4196 (-)
Type: TC
Location: 3471 - 4196 (-)
Gene ID: k141_317419_6
Type: TC
Location: 4220 - 5029 (-)
Type: TC
Location: 4220 - 5029 (-)
Gene ID: k141_317419_7
Type: pfam
Location: 5383 - 6231 (-)
Type: pfam
Location: 5383 - 6231 (-)
Gene ID: k141_317419_8
Type: pfam
Location: 6428 - 7441 (+)
Type: pfam
Location: 6428 - 7441 (+)
Gene ID: k141_317419_9
Type: CAZyme
Location: 7491 - 10460 (-)
Type: CAZyme
Location: 7491 - 10460 (-)
Gene ID: k141_317419_10
Type: pfam
Location: 10586 - 11734 (-)
Type: pfam
Location: 10586 - 11734 (-)
Gene ID: k141_317419_11
Type: pfam
Location: 11737 - 13047 (-)
Type: pfam
Location: 11737 - 13047 (-)
Gene ID: k141_317419_12
Type: CAZyme
Location: 13060 - 14184 (-)
Type: CAZyme
Location: 13060 - 14184 (-)
Gene ID: k141_317419_13
Type: pfam
Location: 14191 - 15456 (-)
Type: pfam
Location: 14191 - 15456 (-)
Gene ID: k141_317419_14
Type: pfam
Location: 15688 - 16320 (-)
Type: pfam
Location: 15688 - 16320 (-)
Gene ID: k141_317419_15
Type: TC
Location: 16353 - 16964 (-)
Type: TC
Location: 16353 - 16964 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Tissierellaceae
Genus
Tissierella_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.