Cluster: CGMR060252_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: CGMR060252
- CGC Family ID: CGCFAM_00580
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_53357 | k141_53357_20 | 18775 | 21147 | - | GT35 |
| CAZyme | k141_53357 | k141_53357_21 | 21150 | 22628 | - | GH77 |
| pfam | k141_53357 | k141_53357_22 | 22701 | 23720 | - | Citrate_ly_lig |
| TF | k141_53357 | k141_53357_23 | 23738 | 24769 | - | LacI |
| TC | k141_53357 | k141_53357_24 | 24787 | 25881 | - | 3.A.1.1.26 |
| TC | k141_53357 | k141_53357_25 | 25901 | 26809 | - | 3.A.1.1.26 |
| TC | k141_53357 | k141_53357_26 | 26806 | 28890 | - | 3.A.1.1.2 |
Gene ID: k141_53357_20
Type: CAZyme
Location: 18775 - 21147 (-)
Type: CAZyme
Location: 18775 - 21147 (-)
Gene ID: k141_53357_21
Type: CAZyme
Location: 21150 - 22628 (-)
Type: CAZyme
Location: 21150 - 22628 (-)
Gene ID: k141_53357_22
Type: pfam
Location: 22701 - 23720 (-)
Type: pfam
Location: 22701 - 23720 (-)
Gene ID: k141_53357_23
Type: TF
Location: 23738 - 24769 (-)
Type: TF
Location: 23738 - 24769 (-)
Gene ID: k141_53357_24
Type: TC
Location: 24787 - 25881 (-)
Type: TC
Location: 24787 - 25881 (-)
Gene ID: k141_53357_25
Type: TC
Location: 25901 - 26809 (-)
Type: TC
Location: 25901 - 26809 (-)
Gene ID: k141_53357_26
Type: TC
Location: 26806 - 28890 (-)
Type: TC
Location: 26806 - 28890 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Tissierellaceae
Genus
Tissierella_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.