Cluster: CGMR060228_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR060228
- CGC Family ID: CGCFAM_00553
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_184024 | k141_184024_15 | 14349 | 14882 | - | 3.D.1.8.1 |
| pfam | k141_184024 | k141_184024_16 | 15155 | 16513 | - | TRAM | TRM5-TYW2_MTfase | MTS | tRNA_U5-meth_tr | tRNA_U5-meth_tr |
| pfam | k141_184024 | k141_184024_17 | 16738 | 17160 | - | GtrA_DPMS_TM |
| CAZyme | k141_184024 | k141_184024_18 | 17713 | 18708 | - | GT81 |
| CAZyme | k141_184024 | k141_184024_19 | 18846 | 20210 | + | GT28 |
| TC | k141_184024 | k141_184024_20 | 20250 | 20969 | + | 1.I.1.1.3 |
Gene ID: k141_184024_15
Type: TC
Location: 14349 - 14882 (-)
Type: TC
Location: 14349 - 14882 (-)
Gene ID: k141_184024_16
Type: pfam
Location: 15155 - 16513 (-)
Type: pfam
Location: 15155 - 16513 (-)
Gene ID: k141_184024_17
Type: pfam
Location: 16738 - 17160 (-)
Type: pfam
Location: 16738 - 17160 (-)
Gene ID: k141_184024_18
Type: CAZyme
Location: 17713 - 18708 (-)
Type: CAZyme
Location: 17713 - 18708 (-)
Gene ID: k141_184024_19
Type: CAZyme
Location: 18846 - 20210 (+)
Type: CAZyme
Location: 18846 - 20210 (+)
Gene ID: k141_184024_20
Type: TC
Location: 20250 - 20969 (+)
Type: TC
Location: 20250 - 20969 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
CABRXV01
Species
CABRXV01 sp900754955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.