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Cluster: CGMR059985_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_13515 k141_13515_14 12772 13212 + 4.A.6.1.16
pfam k141_13515 k141_13515_15 13214 13498 + YajC
TF k141_13515 k141_13515_16 13553 14737 - HTH_AraC | HTH_AraC
TC k141_13515 k141_13515_17 15024 15500 + 4.A.6.1.4
TC k141_13515 k141_13515_18 15531 16328 + 4.A.6.1.4
TC k141_13515 k141_13515_19 16318 17244 + 4.A.6.1.4
pfam k141_13515 k141_13515_20 17419 18720 + GatZ_KbaZ-like
sulfatase k141_13515 k141_13515_21 18807 19517 - S1_9
CAZyme k141_13515 k141_13515_22 19575 20576 - GT4
CAZyme k141_13515 k141_13515_23 20716 21870 + CE9
TC k141_13515 k141_13515_24 21921 24227 - 3.A.3.23.2
TC k141_13515 k141_13515_25 24413 25150 + 3.A.1.3.25
TC k141_13515 k141_13515_26 25158 25832 + 3.A.1.3.25
TC k141_13515 k141_13515_27 25825 26556 + 3.A.1.3.15
pfam k141_13515 k141_13515_28 26616 27185 + Flavodoxin_2 | FMN_red
pfam k141_13515 k141_13515_29 27277 28257 + Semialdhyde_dh | Semialdhyde_dhC
TC k141_13515 k141_13515_30 28264 29592 + 2.A.3.8.3
Gene ID: k141_13515_14
Type: TC
Location: 12772 - 13212 (+)
Gene ID: k141_13515_15
Type: pfam
Location: 13214 - 13498 (+)
Gene ID: k141_13515_16
Type: TF
Location: 13553 - 14737 (-)
Gene ID: k141_13515_17
Type: TC
Location: 15024 - 15500 (+)
Gene ID: k141_13515_18
Type: TC
Location: 15531 - 16328 (+)
Gene ID: k141_13515_19
Type: TC
Location: 16318 - 17244 (+)
Gene ID: k141_13515_20
Type: pfam
Location: 17419 - 18720 (+)
Gene ID: k141_13515_21
Type: sulfatase
Location: 18807 - 19517 (-)
Gene ID: k141_13515_22
Type: CAZyme
Location: 19575 - 20576 (-)
Gene ID: k141_13515_23
Type: CAZyme
Location: 20716 - 21870 (+)
Gene ID: k141_13515_24
Type: TC
Location: 21921 - 24227 (-)
Gene ID: k141_13515_25
Type: TC
Location: 24413 - 25150 (+)
Gene ID: k141_13515_26
Type: TC
Location: 25158 - 25832 (+)
Gene ID: k141_13515_27
Type: TC
Location: 25825 - 26556 (+)
Gene ID: k141_13515_28
Type: pfam
Location: 26616 - 27185 (+)
Gene ID: k141_13515_29
Type: pfam
Location: 27277 - 28257 (+)
Gene ID: k141_13515_30
Type: TC
Location: 28264 - 29592 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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