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Cluster: CGMR059923_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_35896 k141_35896_30 23489 24460 + GH99
TF k141_35896 k141_35896_31 24463 25914 - HTH_8
TC k141_35896 k141_35896_32 26125 26592 - 4.A.2.1.16
pfam k141_35896 k141_35896_33 26705 27346 - Ribosomal_S30AE | Ribosom_S30AE_C
pfam k141_35896 k141_35896_34 27427 28947 - Sigma54_AID | Sigma54_DBD | Sigma54_CBD
TC k141_35896 k141_35896_35 29106 29861 + 9.B.124.1.8
pfam k141_35896 k141_35896_36 29858 31108 - FAD_binding_2 | FAD_binding_3 | SE
TC k141_35896 k141_35896_37 31199 32554 + 2.A.23.1.3
Gene ID: k141_35896_30
Type: CAZyme
Location: 23489 - 24460 (+)
Gene ID: k141_35896_31
Type: TF
Location: 24463 - 25914 (-)
Gene ID: k141_35896_32
Type: TC
Location: 26125 - 26592 (-)
Gene ID: k141_35896_33
Type: pfam
Location: 26705 - 27346 (-)
Gene ID: k141_35896_34
Type: pfam
Location: 27427 - 28947 (-)
Gene ID: k141_35896_35
Type: TC
Location: 29106 - 29861 (+)
Gene ID: k141_35896_36
Type: pfam
Location: 29858 - 31108 (-)
Gene ID: k141_35896_37
Type: TC
Location: 31199 - 32554 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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