Cluster: CGMR059836_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR059836
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_1001551 | k141_1001551_10 | 7851 | 9086 | - | GT30 |
| pfam | k141_1001551 | k141_1001551_11 | 9145 | 9510 | - | UPF0102 |
| peptidase | k141_1001551 | k141_1001551_12 | 9568 | 10269 | - | S51.001 |
| TC | k141_1001551 | k141_1001551_13 | 10439 | 10675 | + | 3.D.1.6.4 |
Gene ID: k141_1001551_10
Type: CAZyme
Location: 7851 - 9086 (-)
Type: CAZyme
Location: 7851 - 9086 (-)
Gene ID: k141_1001551_11
Type: pfam
Location: 9145 - 9510 (-)
Type: pfam
Location: 9145 - 9510 (-)
Gene ID: k141_1001551_12
Type: peptidase
Location: 9568 - 10269 (-)
Type: peptidase
Location: 9568 - 10269 (-)
Gene ID: k141_1001551_13
Type: TC
Location: 10439 - 10675 (+)
Type: TC
Location: 10439 - 10675 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp017380275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_1001551_13 | omnivore > vegan | 1.69425 | 0.00350 |
| k141_1001551_13 | vegetarian > vegan | 1.09798 | 0.00701 |