Cluster: CGMR059717_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR059717
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_709094 | k141_709094_29 | 30732 | 31913 | - | 3.A.1.1.6 |
| TF | k141_709094 | k141_709094_30 | 32032 | 33039 | - | LacI |
| CAZyme | k141_709094 | k141_709094_31 | 33162 | 35213 | + | GH13_28 |
| pfam | k141_709094 | k141_709094_32 | 35320 | 35814 | - | LuxS |
| TC | k141_709094 | k141_709094_33 | 35837 | 37078 | - | 2.A.81.2.2 |
Gene ID: k141_709094_29
Type: TC
Location: 30732 - 31913 (-)
Type: TC
Location: 30732 - 31913 (-)
Gene ID: k141_709094_30
Type: TF
Location: 32032 - 33039 (-)
Type: TF
Location: 32032 - 33039 (-)
Gene ID: k141_709094_31
Type: CAZyme
Location: 33162 - 35213 (+)
Type: CAZyme
Location: 33162 - 35213 (+)
Gene ID: k141_709094_32
Type: pfam
Location: 35320 - 35814 (-)
Type: pfam
Location: 35320 - 35814 (-)
Gene ID: k141_709094_33
Type: TC
Location: 35837 - 37078 (-)
Type: TC
Location: 35837 - 37078 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp946185185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.