Cluster: CGMR059717_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR059717
- CGC Family ID: CGCFAM_08769
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_3336 | k141_3336_213 | 244938 | 245762 | + | 3.A.1.132.3 |
| pfam | k141_3336 | k141_3336_214 | 245770 | 246171 | - | 4HBT | 4HBT_2 | Acyl-ACP_TE_C |
| CAZyme | k141_3336 | k141_3336_215 | 246341 | 247630 | + | GH3 |
| pfam | k141_3336 | k141_3336_216 | 247640 | 248497 | + | Methyltr_RsmB-F |
| peptidase | k141_3336 | k141_3336_217 | 248590 | 249333 | + | M20.UNW |
| TC | k141_3336 | k141_3336_218 | 249499 | 251682 | - | 1.B.52.2.1 |
Gene ID: k141_3336_213
Type: TC
Location: 244938 - 245762 (+)
Type: TC
Location: 244938 - 245762 (+)
Gene ID: k141_3336_214
Type: pfam
Location: 245770 - 246171 (-)
Type: pfam
Location: 245770 - 246171 (-)
Gene ID: k141_3336_215
Type: CAZyme
Location: 246341 - 247630 (+)
Type: CAZyme
Location: 246341 - 247630 (+)
Gene ID: k141_3336_216
Type: pfam
Location: 247640 - 248497 (+)
Type: pfam
Location: 247640 - 248497 (+)
Gene ID: k141_3336_217
Type: peptidase
Location: 248590 - 249333 (+)
Type: peptidase
Location: 248590 - 249333 (+)
Gene ID: k141_3336_218
Type: TC
Location: 249499 - 251682 (-)
Type: TC
Location: 249499 - 251682 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp946185185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.