Cluster: CGMR059717_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR059717
- CGC Family ID: CGCFAM_00088
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_3336 | k141_3336_113 | 137722 | 139311 | + | GH77 |
| STP | k141_3336 | k141_3336_114 | 139449 | 140720 | + | SBP_bac_1 |
| TC | k141_3336 | k141_3336_115 | 140818 | 142353 | + | 3.A.1.1.45 |
| TC | k141_3336 | k141_3336_116 | 142350 | 143183 | + | 3.A.1.1.45 |
| TC | k141_3336 | k141_3336_117 | 143291 | 143752 | + | 2.A.51.1.6 |
| TC | k141_3336 | k141_3336_118 | 143754 | 144335 | + | 2.A.51.1.6 |
Gene ID: k141_3336_113
Type: CAZyme
Location: 137722 - 139311 (+)
Type: CAZyme
Location: 137722 - 139311 (+)
Gene ID: k141_3336_114
Type: STP
Location: 139449 - 140720 (+)
Type: STP
Location: 139449 - 140720 (+)
Gene ID: k141_3336_115
Type: TC
Location: 140818 - 142353 (+)
Type: TC
Location: 140818 - 142353 (+)
Gene ID: k141_3336_116
Type: TC
Location: 142350 - 143183 (+)
Type: TC
Location: 142350 - 143183 (+)
Gene ID: k141_3336_117
Type: TC
Location: 143291 - 143752 (+)
Type: TC
Location: 143291 - 143752 (+)
Gene ID: k141_3336_118
Type: TC
Location: 143754 - 144335 (+)
Type: TC
Location: 143754 - 144335 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp946185185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.