Cluster: CGMR059717_CGC24
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR059717
- CGC Family ID: CGCFAM_00302
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_452623 | k141_452623_19 | 20961 | 21758 | - | 3.D.6.1.3 |
| TC | k141_452623 | k141_452623_20 | 21768 | 22346 | - | 3.D.6.1.2 |
| TC | k141_452623 | k141_452623_21 | 22343 | 23050 | - | 3.D.6.1.3 |
| pfam | k141_452623 | k141_452623_22 | 23043 | 23630 | - | FMN_bind |
| TC | k141_452623 | k141_452623_23 | 23627 | 24676 | - | 3.D.6.1.2 |
| TC | k141_452623 | k141_452623_24 | 24694 | 26064 | - | 3.D.6.1.2 |
| CAZyme | k141_452623 | k141_452623_25 | 26409 | 27998 | - | GT5 |
Gene ID: k141_452623_19
Type: TC
Location: 20961 - 21758 (-)
Type: TC
Location: 20961 - 21758 (-)
Gene ID: k141_452623_20
Type: TC
Location: 21768 - 22346 (-)
Type: TC
Location: 21768 - 22346 (-)
Gene ID: k141_452623_21
Type: TC
Location: 22343 - 23050 (-)
Type: TC
Location: 22343 - 23050 (-)
Gene ID: k141_452623_22
Type: pfam
Location: 23043 - 23630 (-)
Type: pfam
Location: 23043 - 23630 (-)
Gene ID: k141_452623_23
Type: TC
Location: 23627 - 24676 (-)
Type: TC
Location: 23627 - 24676 (-)
Gene ID: k141_452623_24
Type: TC
Location: 24694 - 26064 (-)
Type: TC
Location: 24694 - 26064 (-)
Gene ID: k141_452623_25
Type: CAZyme
Location: 26409 - 27998 (-)
Type: CAZyme
Location: 26409 - 27998 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp946185185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.