Cluster: CGMR059717_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR059717
- CGC Family ID: CGCFAM_02819
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_316804 | k141_316804_28 | 31535 | 33595 | - | 1.I.1.1.3 |
| pfam | k141_316804 | k141_316804_29 | 33719 | 34399 | + | CarD_TRCF_RID | CarD_C |
| pfam | k141_316804 | k141_316804_30 | 34356 | 35579 | + | IspD | YgbB |
| CAZyme | k141_316804 | k141_316804_31 | 35576 | 36982 | - | GH13_28 |
Gene ID: k141_316804_28
Type: TC
Location: 31535 - 33595 (-)
Type: TC
Location: 31535 - 33595 (-)
Gene ID: k141_316804_29
Type: pfam
Location: 33719 - 34399 (+)
Type: pfam
Location: 33719 - 34399 (+)
Gene ID: k141_316804_30
Type: pfam
Location: 34356 - 35579 (+)
Type: pfam
Location: 34356 - 35579 (+)
Gene ID: k141_316804_31
Type: CAZyme
Location: 35576 - 36982 (-)
Type: CAZyme
Location: 35576 - 36982 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp946185185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.