Cluster: CGMR059717_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR059717
- CGC Family ID: CGCFAM_00237
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_66487 | k141_66487_27 | 26428 | 28611 | + | CBM35 |
| TF | k141_66487 | k141_66487_28 | 28612 | 29175 | - | HTH_11 |
| pfam | k141_66487 | k141_66487_29 | 29213 | 30064 | - | QRPTase_C | QRPTase_N |
| TC | k141_66487 | k141_66487_30 | 30009 | 31394 | - | 3.D.10.1.4 |
Gene ID: k141_66487_27
Type: CAZyme
Location: 26428 - 28611 (+)
Type: CAZyme
Location: 26428 - 28611 (+)
Gene ID: k141_66487_28
Type: TF
Location: 28612 - 29175 (-)
Type: TF
Location: 28612 - 29175 (-)
Gene ID: k141_66487_29
Type: pfam
Location: 29213 - 30064 (-)
Type: pfam
Location: 29213 - 30064 (-)
Gene ID: k141_66487_30
Type: TC
Location: 30009 - 31394 (-)
Type: TC
Location: 30009 - 31394 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp946185185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.