Cluster: CGMR059664_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR059664
- CGC Family ID: CGCFAM_00889
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_18248 | k141_18248_35 | 37183 | 38277 | + | GT4 |
| CAZyme | k141_18248 | k141_18248_36 | 38277 | 39110 | + | CE4 |
| CAZyme | k141_18248 | k141_18248_37 | 39110 | 39883 | + | GT2 |
| pfam | k141_18248 | k141_18248_38 | 39886 | 40650 | - | DUF218 |
| CAZyme | k141_18248 | k141_18248_39 | 40658 | 41614 | - | GT9 |
| TC | k141_18248 | k141_18248_40 | 41686 | 43473 | + | 3.A.1.106.1 |
Gene ID: k141_18248_35
Type: CAZyme
Location: 37183 - 38277 (+)
Type: CAZyme
Location: 37183 - 38277 (+)
Gene ID: k141_18248_36
Type: CAZyme
Location: 38277 - 39110 (+)
Type: CAZyme
Location: 38277 - 39110 (+)
Gene ID: k141_18248_37
Type: CAZyme
Location: 39110 - 39883 (+)
Type: CAZyme
Location: 39110 - 39883 (+)
Gene ID: k141_18248_38
Type: pfam
Location: 39886 - 40650 (-)
Type: pfam
Location: 39886 - 40650 (-)
Gene ID: k141_18248_39
Type: CAZyme
Location: 40658 - 41614 (-)
Type: CAZyme
Location: 40658 - 41614 (-)
Gene ID: k141_18248_40
Type: TC
Location: 41686 - 43473 (+)
Type: TC
Location: 41686 - 43473 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Paenalcaligenes
Species
Paenalcaligenes faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.