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Cluster: CGMR059653_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_140310 k141_140310_34 38311 40842 + 3.A.3.5.15
pfam k141_140310 k141_140310_35 41301 42671 + MatE | MatE
pfam k141_140310 k141_140310_36 42863 45571 + PRD | EIIA-man
TC k141_140310 k141_140310_37 45558 45983 + 4.A.6.1.9
TC k141_140310 k141_140310_38 46003 46467 + 4.A.6.1.19
TC k141_140310 k141_140310_39 46478 47254 + 4.A.6.1.19
TC k141_140310 k141_140310_40 47275 48114 + 4.A.6.1.19
STP k141_140310 k141_140310_41 48171 49136 + SIS | SIS
pfam k141_140310 k141_140310_42 49205 49840 + Hydrolase | HAD_2
CAZyme k141_140310 k141_140310_43 50051 51520 + GH77
Gene ID: k141_140310_34
Type: TC
Location: 38311 - 40842 (+)
Gene ID: k141_140310_35
Type: pfam
Location: 41301 - 42671 (+)
Gene ID: k141_140310_36
Type: pfam
Location: 42863 - 45571 (+)
Gene ID: k141_140310_37
Type: TC
Location: 45558 - 45983 (+)
Gene ID: k141_140310_38
Type: TC
Location: 46003 - 46467 (+)
Gene ID: k141_140310_39
Type: TC
Location: 46478 - 47254 (+)
Gene ID: k141_140310_40
Type: TC
Location: 47275 - 48114 (+)
Gene ID: k141_140310_41
Type: STP
Location: 48171 - 49136 (+)
Gene ID: k141_140310_42
Type: pfam
Location: 49205 - 49840 (+)
Gene ID: k141_140310_43
Type: CAZyme
Location: 50051 - 51520 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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