Cluster: CGMR059534_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR059534
- CGC Family ID: CGCFAM_00115
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_43242 | k141_43242_58 | 76228 | 77448 | - | GH25 |
| NULL(UNKNOWN) | k141_43242 | k141_43242_59 | 77558 | 77815 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_43242 | k141_43242_60 | 78568 | 79062 | + | Trns_repr_metal |
| TC | k141_43242 | k141_43242_61 | 79074 | 81656 | + | 3.A.3.5.15 |
| pfam | k141_43242 | k141_43242_62 | 81801 | 82706 | + | IU_nuc_hydro | Sde182_NH-like |
| TC | k141_43242 | k141_43242_63 | 83353 | 84813 | - | 2.A.50.2.1 |
Gene ID: k141_43242_58
Type: CAZyme
Location: 76228 - 77448 (-)
Type: CAZyme
Location: 76228 - 77448 (-)
Gene ID: k141_43242_59
Type:
Location: 77558 - 77815 (-)
Type:
Location: 77558 - 77815 (-)
Gene ID: k141_43242_60
Type: pfam
Location: 78568 - 79062 (+)
Type: pfam
Location: 78568 - 79062 (+)
Gene ID: k141_43242_61
Type: TC
Location: 79074 - 81656 (+)
Type: TC
Location: 79074 - 81656 (+)
Gene ID: k141_43242_62
Type: pfam
Location: 81801 - 82706 (+)
Type: pfam
Location: 81801 - 82706 (+)
Gene ID: k141_43242_63
Type: TC
Location: 83353 - 84813 (-)
Type: TC
Location: 83353 - 84813 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
Avispirillum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.