Cluster: CGMR059534_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR059534
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_126912 | k141_126912_18 | 17835 | 18731 | + | 3.A.1.148.3 |
| pfam | k141_126912 | k141_126912_19 | 18721 | 19947 | + | ABC2_membrane_2 |
| NULL(UNKNOWN) | k141_126912 | k141_126912_20 | 19966 | 20334 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_126912 | k141_126912_21 | 20447 | 22240 | - | GH20 |
Gene ID: k141_126912_18
Type: TC
Location: 17835 - 18731 (+)
Type: TC
Location: 17835 - 18731 (+)
Gene ID: k141_126912_19
Type: pfam
Location: 18721 - 19947 (+)
Type: pfam
Location: 18721 - 19947 (+)
Gene ID: k141_126912_20
Type:
Location: 19966 - 20334 (+)
Type:
Location: 19966 - 20334 (+)
Gene ID: k141_126912_21
Type: CAZyme
Location: 20447 - 22240 (-)
Type: CAZyme
Location: 20447 - 22240 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
Avispirillum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.