Cluster: CGMR059534_CGC12
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR059534
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_323116 | k141_323116_75 | 74390 | 75430 | - | 9.B.18.2.1 |
| TC | k141_323116 | k141_323116_76 | 75411 | 76739 | - | 2.A.66.5.2 |
| CAZyme | k141_323116 | k141_323116_77 | 76736 | 77908 | - | GT4 |
| pfam | k141_323116 | k141_323116_78 | 78036 | 82673 | - | NAGPA |
| pfam | k141_323116 | k141_323116_79 | 82737 | 83555 | - | LicD |
| CAZyme | k141_323116 | k141_323116_80 | 83527 | 84756 | - | GT4 |
| pfam | k141_323116 | k141_323116_81 | 84771 | 85832 | - | EpsG |
| pfam | k141_323116 | k141_323116_82 | 85897 | 87087 | - | Glycos_transf_1 | Glyco_trans_1_4 |
| CAZyme | k141_323116 | k141_323116_83 | 87136 | 87897 | - | GT2 |
| pfam | k141_323116 | k141_323116_84 | 87921 | 88703 | - | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 |
| TC | k141_323116 | k141_323116_85 | 88700 | 89338 | - | 9.B.18.1.2 |
| TC | k141_323116 | k141_323116_86 | 89367 | 91418 | - | 9.B.18.2.1 |
Gene ID: k141_323116_75
Type: TC
Location: 74390 - 75430 (-)
Type: TC
Location: 74390 - 75430 (-)
Gene ID: k141_323116_76
Type: TC
Location: 75411 - 76739 (-)
Type: TC
Location: 75411 - 76739 (-)
Gene ID: k141_323116_77
Type: CAZyme
Location: 76736 - 77908 (-)
Type: CAZyme
Location: 76736 - 77908 (-)
Gene ID: k141_323116_78
Type: pfam
Location: 78036 - 82673 (-)
Type: pfam
Location: 78036 - 82673 (-)
Gene ID: k141_323116_79
Type: pfam
Location: 82737 - 83555 (-)
Type: pfam
Location: 82737 - 83555 (-)
Gene ID: k141_323116_80
Type: CAZyme
Location: 83527 - 84756 (-)
Type: CAZyme
Location: 83527 - 84756 (-)
Gene ID: k141_323116_81
Type: pfam
Location: 84771 - 85832 (-)
Type: pfam
Location: 84771 - 85832 (-)
Gene ID: k141_323116_82
Type: pfam
Location: 85897 - 87087 (-)
Type: pfam
Location: 85897 - 87087 (-)
Gene ID: k141_323116_83
Type: CAZyme
Location: 87136 - 87897 (-)
Type: CAZyme
Location: 87136 - 87897 (-)
Gene ID: k141_323116_84
Type: pfam
Location: 87921 - 88703 (-)
Type: pfam
Location: 87921 - 88703 (-)
Gene ID: k141_323116_85
Type: TC
Location: 88700 - 89338 (-)
Type: TC
Location: 88700 - 89338 (-)
Gene ID: k141_323116_86
Type: TC
Location: 89367 - 91418 (-)
Type: TC
Location: 89367 - 91418 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
Avispirillum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.