Cluster: CGMR059534_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR059534
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_56796 | k141_56796_62 | 68274 | 70562 | + | 3.A.1.135.5 |
| pfam | k141_56796 | k141_56796_63 | 71060 | 71626 | + | DUF1854 |
| TC | k141_56796 | k141_56796_64 | 71639 | 73780 | + | 3.A.1.135.5 |
| pfam | k141_56796 | k141_56796_65 | 73888 | 74403 | + | ECF-ribofla_trS |
| pfam | k141_56796 | k141_56796_66 | 74400 | 75506 | - | BNR_2 |
| CAZyme | k141_56796 | k141_56796_67 | 76104 | 77324 | + | GH109 |
Gene ID: k141_56796_62
Type: TC
Location: 68274 - 70562 (+)
Type: TC
Location: 68274 - 70562 (+)
Gene ID: k141_56796_63
Type: pfam
Location: 71060 - 71626 (+)
Type: pfam
Location: 71060 - 71626 (+)
Gene ID: k141_56796_64
Type: TC
Location: 71639 - 73780 (+)
Type: TC
Location: 71639 - 73780 (+)
Gene ID: k141_56796_65
Type: pfam
Location: 73888 - 74403 (+)
Type: pfam
Location: 73888 - 74403 (+)
Gene ID: k141_56796_66
Type: pfam
Location: 74400 - 75506 (-)
Type: pfam
Location: 74400 - 75506 (-)
Gene ID: k141_56796_67
Type: CAZyme
Location: 76104 - 77324 (+)
Type: CAZyme
Location: 76104 - 77324 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
Avispirillum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.